Zanni Riccardo, Galvez-Llompart Maria, Garcia-Domenech Ramon, Galvez Jorge
Molecular Topology and Drug Design Unit, Department of Physical Chemistry, University of Valencia , Valencia, Spain.
Departamento de Microbiologia, Facultad de Ciencias, Universidad de Malaga , Málaga, Spain.
Expert Opin Drug Discov. 2020 Oct;15(10):1133-1144. doi: 10.1080/17460441.2020.1770223. Epub 2020 Jun 4.
Most methods in molecular and drug design are currently based on physicochemical descriptors. However, molecular topology, which relies on topological descriptors, has also shown value for molecular design even if it does not take into account the physical or chemical properties of ligands and receptors, including the ligand-receptor interaction itself.
Herein, the authors provide new insights into the importance of molecular topology according to some of the latest discoveries in physics and chemistry. Furthermore, the authors report on the most significant achievements in drug design using molecular topology over the last 5 years and give their expert perspectives on the subject as a whole.
Molecular topology is a new paradigm which is independent of physicochemical molecular descriptors. This fact explains the viability of both the discovery of new lead compounds with a minimum of information derived from mathematical-topological patterns and the interpretation results in structural and physicochemical terms.
目前,分子和药物设计中的大多数方法都基于物理化学描述符。然而,依赖拓扑描述符的分子拓扑学,即便未考虑配体和受体的物理或化学性质(包括配体 - 受体相互作用本身),也已在分子设计中展现出价值。
在此,作者依据物理和化学领域的一些最新发现,对分子拓扑学的重要性提供了新见解。此外,作者报告了过去5年中使用分子拓扑学进行药物设计的最重要成果,并给出了他们对整个主题的专业观点。
分子拓扑学是一种独立于物理化学分子描述符的新范式。这一事实解释了基于最少数学 - 拓扑模式信息发现新先导化合物以及从结构和物理化学角度解释结果的可行性。