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组蛋白甲基转移酶 ICU11 作为 Polycomb 抑制复合物 2 的辅助蛋白。

The epigenetic regulator ICU11 as an accessory protein of Polycomb Repressive Complex 2.

机构信息

Department of Cell and Developmental Biology, John Innes Centre, Colney Lane, NR47UH Norwich, United Kingdom.

Institute of Molecular Plant Sciences, University of Edinburgh, Max Born Crescent, EH9 3BF Edinburgh, United Kingdom.

出版信息

Proc Natl Acad Sci U S A. 2020 Jul 14;117(28):16660-16666. doi: 10.1073/pnas.1920621117. Epub 2020 Jun 29.

DOI:10.1073/pnas.1920621117
PMID:32601198
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7368280/
Abstract

Molecular mechanisms enabling the switching and maintenance of epigenetic states are not fully understood. Distinct histone modifications are often associated with ON/OFF epigenetic states, but how these states are stably maintained through DNA replication, yet in certain situations switch from one to another remains unclear. Here, we address this problem through identification of INCURVATA11 (ICU11) as a Polycomb Repressive Complex 2 accessory protein. ICU11 robustly immunoprecipitated in vivo with PRC2 core components and the accessory proteins, EMBRYONIC FLOWER 1 (EMF1), LIKE HETEROCHROMATIN PROTEIN1 (LHP1), and TELOMERE_REPEAT_BINDING FACTORS (TRBs). encodes a 2-oxoglutarate-dependent dioxygenase, an activity associated with histone demethylation in other organisms, and mutant plants show defects in multiple aspects of the epigenome. To investigate its primary molecular function we identified the () as a direct target and found disrupted the cold-induced, Polycomb-mediated silencing underlying vernalization. prevented reduction in H3K36me3 levels normally seen during the early cold phase, supporting a role for ICU11 in H3K36me3 demethylation. This was coincident with an attenuation of H3K27me3 at the internal nucleation site in , and reduction in H3K27me3 levels across the body of the gene after plants were returned to the warm. Thus, ICU11 is required for the cold-induced epigenetic switching between the mutually exclusive chromatin states at , from the active H3K36me3 state to the silenced H3K27me3 state. These data support the importance of physical coupling of histone modification activities to promote epigenetic switching between opposing chromatin states.

摘要

分子机制使表观遗传状态的转换和维持尚不完全清楚。不同的组蛋白修饰通常与 ON/OFF 表观遗传状态相关联,但这些状态如何在 DNA 复制过程中稳定维持,而在某些情况下又从一种状态转换为另一种状态尚不清楚。在这里,我们通过鉴定 INCURVATA11(ICU11)作为多梳抑制复合物 2 辅助蛋白来解决这个问题。ICU11 与 PRC2 核心成分和辅助蛋白 EMF1、LHP1 和 TRBs 在体内强烈免疫沉淀。 编码一个 2-氧戊二酸依赖性双加氧酶,一种在其他生物中与组蛋白去甲基化相关的活性,突变体植物在表观基因组的多个方面表现出缺陷。为了研究其主要的分子功能,我们鉴定了 ()作为直接靶标,并发现 破坏了冷诱导的、多梳介导的 vernalization 沉默。 阻止了在早期冷相期间通常观察到的 H3K36me3 水平的降低,这支持了 ICU11 在 H3K36me3 去甲基化中的作用。这与 内部核化位点处 H3K27me3 的衰减一致,并且在植物返回温暖后,整个基因的 H3K27me3 水平降低。因此,ICU11 是在冷诱导的表观遗传开关之间所必需的,该开关在 处的相互排斥的染色质状态之间进行转换,从活性 H3K36me3 状态到沉默的 H3K27me3 状态。这些数据支持将组蛋白修饰活性物理偶联以促进相反染色质状态之间的表观遗传转换的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5310/7368280/1111cb8c97b5/pnas.1920621117fig04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5310/7368280/94f940aeb42c/pnas.1920621117fig01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5310/7368280/c0605fd3676a/pnas.1920621117fig02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5310/7368280/dced271388a0/pnas.1920621117fig03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5310/7368280/1111cb8c97b5/pnas.1920621117fig04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5310/7368280/94f940aeb42c/pnas.1920621117fig01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5310/7368280/c0605fd3676a/pnas.1920621117fig02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5310/7368280/dced271388a0/pnas.1920621117fig03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5310/7368280/1111cb8c97b5/pnas.1920621117fig04.jpg

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