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安纳托利亚地区通过表型和基因型检测发现高毒力肺炎克雷伯菌的流行率较低。

Low prevalence of hypervirulent Klebsiella pneumoniae in Anatolia, screened via phenotypic and genotypic testing.

机构信息

1Vocational School of Health Services, Hacettepe University, Ankara, Turkey.

2Department of Medical Microbiology, Faculty of Medicine, Hacettepe University, Ankara, Turkey.

出版信息

Acta Microbiol Immunol Hung. 2020 Jul 3;67(2):120-126. doi: 10.1556/030.2020.01143.

Abstract

Hypervirulent Klebsiella pneumoniae (hvKP) strains are associated with vigorous clinical presentation and relapses. Initially reported from Asia, these variants have spread globally and become an emerging agent of significant health threat. This study was carried out to identify hvKP strains in a previously uninvestigated region and to evaluate the impact of commonly-employed phenotypic and genotypic markers as diagnostic assays. A total of 111 blood culture isolates, collected at a tertiary care center was investigated. The hvKP strains were sought by a string test and the amplification of partial magA, rmpA, iucA and peg344. All products were characterized via sequencing. Evidence for hvKP was observed in 10.8% via iucA amplification (7.2%), string test (2.7%) and magA amplification (0.9%). Specific products were not produced by assays targeting rmpA and peg344 genes. Antibiotic susceptibility patterns compatible with possible extensive or pan-antimicrobial resistance was noted in 66.7% of the hvKP candidate strains. Capsule type in the magA positive strain was characterized as K5. We have detected hvKP in low prevalence at a region with no prior documentation. Targetting the aerobactin gene via iucA amplification provided the most accurate detection in this setting. The epidemiology of hvKP in Anatolia requires elucidation for effective control and management.

摘要

高毒力肺炎克雷伯菌(hvKP)菌株与剧烈的临床表现和复发有关。这些变体最初在亚洲被报道,现已在全球范围内传播,并成为一个新兴的重大健康威胁因素。本研究旨在鉴定一个之前未被调查的地区的 hvKP 菌株,并评估常用表型和基因型标记作为诊断检测的效果。在一家三级保健中心共采集了 111 份血培养分离株进行了研究。通过串试验和部分 magA、rmpA、iucA 和 peg344 的扩增来寻找 hvKP 菌株。所有产物均通过测序进行了特征分析。通过 iucA 扩增(7.2%)、串试验(2.7%)和 magA 扩增(0.9%)观察到了 10.8%的 hvKP。针对 rmpA 和 peg344 基因的检测未产生特异性产物。在 66.7%的 hvKP 候选菌株中观察到与可能的广泛或泛抗生素耐药性相匹配的抗生素敏感性模式。magA 阳性菌株的荚膜类型被鉴定为 K5。我们在一个没有先前记录的地区以低流行率检测到了 hvKP。在这种情况下,通过 iucA 扩增靶向铁载体基因提供了最准确的检测。安纳托利亚的 hvKP 流行病学需要阐明,以进行有效的控制和管理。

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