Ferreira Roumayne L, Rezende Graziela S, Damas Marcelo Silva Folhas, Oliveira-Silva Mariana, Pitondo-Silva André, Brito Márcia C A, Leonardecz Eduardo, de Góes Fabiana R, Campanini Emeline Boni, Malavazi Iran, da Cunha Anderson F, Pranchevicius Maria-Cristina da Silva
Departamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, Brazil.
Programas de Pós-graduação em Odontologia e Tecnologia Ambiental, Universidade de Ribeirão Preto, Ribeirão Preto, Brazil.
Front Microbiol. 2020 May 20;11:956. doi: 10.3389/fmicb.2020.00956. eCollection 2020.
has emerged as an important opportunistic pathogen responsible for nosocomial and severe infections. Here, we determined phenotypic and molecular characteristics of 54 isolates obtained from patient samples from intensive-care-unit (ICU) and neonatal intensive-care-unit (NIUC) of a Brazilian tertiary hospital. All isolates were resistant to beta-lactam group antibiotics, and 92.6% (50/54) were not susceptible to tigecycline. Furthermore, 96.3% showed intrinsic resistance to polymyxin E (colistin), a last-resort antibiotic for the treatment of infections caused by MDR (multidrug-resistant) Gram-negative bacteria. In contrast, high susceptibility to other antibiotics such as fluoroquinolones (81.5%), and to aminoglycosides (as gentamicin 81.5%, and amikacin 85.2%) was found. Of all isolates, 24.1% were classified as MDR. The presence of resistance and virulence genes were examined by PCR and sequencing. All isolates carried KPC-carbapenemase ( ) and extended spectrum beta-lactamase genes, 14.8% carried , and 16.7% carried genes, suggesting that bacterial resistance to β-lactam antibiotics found may be associated with these genes. The genes B/F and Y/F that are associated with efflux pump mediated drug extrusion to fluoroquinolones and tigecycline, respectively, were found in 88.9%. The aac(6')-Ib-cr variant gene that can simultaneously induce resistance to aminoglycoside and fluoroquinolone was present in 24.1% of the isolates. Notably, the virulence genes to (i) pore-forming toxin (A); (ii) phospholipase with hemolytic and cytolytic activities (A); (iii) flagellar transcriptional regulator (D); and (iv) positive regulator of prodigiosin and serratamolide production (P) were present in 98.2%. The genetic relationship among the isolates determined by ERIC-PCR demonstrated that the vast majority of isolates were grouped in a single cluster with 86.4% genetic similarity. In addition, many isolates showed 100% genetic similarity to each other, suggesting that the that circulate in this ICU are closely related. Our results suggest that the antimicrobial resistance to many drugs currently used to treat ICU and NIUC patients, associated with the high frequency of resistance and virulence genes is a worrisome phenomenon. Our findings emphasize the importance of active surveillance plans for infection control and to prevent dissemination of these strains.
已成为引起医院感染和严重感染的重要机会性病原体。在此,我们确定了从巴西一家三级医院的重症监护病房(ICU)和新生儿重症监护病房(NIUC)患者样本中分离出的54株菌株的表型和分子特征。所有分离株均对β-内酰胺类抗生素耐药,92.6%(50/54)对替加环素不敏感。此外,96.3%的菌株对多粘菌素E(黏菌素)表现出固有耐药性,多粘菌素E是治疗耐多药(MDR)革兰氏阴性菌引起感染的最后一道防线抗生素。相比之下,发现对其他抗生素如氟喹诺酮类(81.5%)和氨基糖苷类(庆大霉素81.5%、阿米卡星85.2%)高度敏感。在所有分离株中,24.1%被归类为耐多药菌株。通过PCR和测序检测耐药基因和毒力基因的存在。所有分离株均携带KPC-碳青霉烯酶( )和超广谱β-内酰胺酶 基因,14.8%携带 ,16.7%携带 基因,这表明所发现的细菌对β-内酰胺类抗生素的耐药性可能与这些基因有关。分别与氟喹诺酮类和替加环素的外排泵介导的药物外排相关的B/F和Y/F基因在88.9%的菌株中被发现。能同时诱导对氨基糖苷类和氟喹诺酮类耐药的aac(6')-Ib-cr变异基因在24.1%的分离株中存在。值得注意的是,(i)成孔毒素(A)、(ii)具有溶血和细胞溶解活性的磷脂酶(A)、(iii)鞭毛转录调节因子(D)以及(iv)灵菌红素和serratamolide产生的正调节因子(P)的毒力基因在98.2%的菌株中存在。通过ERIC-PCR确定的分离株之间的遗传关系表明,绝大多数分离株聚集在一个单一的簇中,遗传相似性为86.4%。此外,许多分离株彼此之间显示出100%的遗传相似性,这表明在这个ICU中传播的 密切相关。我们的结果表明,目前用于治疗ICU和NIUC患者的许多药物的抗菌耐药性,与耐药基因和毒力基因的高频率相关,是一个令人担忧的现象。我们的研究结果强调了积极监测计划对于感染控制和防止这些菌株传播的重要性。