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评价含肠杆菌科菌的血培养物标准化自动化快速抗菌药敏检测:原理验证研究。

Evaluation of standardized automated rapid antimicrobial susceptibility testing of Enterobacterales-containing blood cultures: a proof-of-principle study.

机构信息

Institut für Medizinische Mikrobiologie, Universität Zürich, Zürich, Schweiz.

Department of Microbiology, Institut Pasteur, Paris, France.

出版信息

J Antimicrob Chemother. 2020 Nov 1;75(11):3218-3229. doi: 10.1093/jac/dkaa336.

Abstract

BACKGROUND

Rapid antimicrobial susceptibility testing (RAST) of bacteria causing bloodstream infections is critical for implementation of appropriate antibiotic regimens.

OBJECTIVES

We have established a procedure to prepare standardized bacterial inocula for Enterobacterales-containing clinical blood cultures and assessed antimicrobial susceptibility testing (AST) data generated with the WASPLabTM automated reading system.

METHODS

A total of 258 blood cultures containing Enterobacterales were examined. Bacteria were enumerated by flow cytometry using the UF-4000 system and adjusted to an inoculum of 106 cfu/mL. Disc diffusion plates were automatically streaked, incubated for 6, 8 and 18 h and imaged using the fully automated WASPLabTM system. Growth inhibition zones were compared with those obtained with inocula prepared from primary subcultures following the EUCAST standard method. Due to time-dependent variations of the inhibition zone diameters, early AST readings were interpreted using time-adjusted tentative breakpoints and areas of technical uncertainty.

RESULTS AND CONCLUSIONS

Inhibition zones obtained after 18 h incubation using an inoculum of 106 cfu/mL prepared directly from blood cultures were highly concordant with those of the EUCAST standard method based on primary subcultures, with categorical agreement (CA) of 95.8%. After 6 and 8 h incubation, 89.5% and 93.0% of the isolates produced interpretable results, respectively, with CA of >98.5% and very low numbers of clinical categorization errors for both the 6 h and 8 h readings. Overall, with the standardized and automated RAST method, consistent AST data from blood cultures containing Enterobacterales can be generated after 6-8 h of incubation and subsequently confirmed by standard reading of the same plate after 18 h.

摘要

背景

快速检测引起血流感染的细菌的药敏性(RAST)对于实施适当的抗生素方案至关重要。

目的

我们建立了一种制备包含肠杆菌科的临床血培养物标准化细菌接种物的程序,并评估了 WASPLabTM 自动化阅读系统生成的药敏试验(AST)数据。

方法

共检查了 258 份包含肠杆菌科的血培养物。使用 UF-4000 系统通过流式细胞术对细菌进行计数,并将其调整至 106 cfu/mL 的接种物。使用自动划线机自动划线,孵育 6、8 和 18 小时,并使用全自动 WASPLabTM 系统进行成像。与根据 EUCAST 标准方法从原始传代培养物制备的接种物获得的生长抑制区进行比较。由于抑菌圈直径随时间变化,早期 AST 读数使用时间调整的暂定折点和技术不确定区域进行解释。

结果与结论

使用直接从血培养物制备的 106 cfu/mL 接种物孵育 18 小时后获得的抑菌圈与基于原始传代培养物的 EUCAST 标准方法高度一致,分类一致率(CA)为 95.8%。孵育 6 和 8 小时后,分别有 89.5%和 93.0%的分离物产生可解释的结果,CA >98.5%,并且两种读数的临床分类错误数量都非常低。总体而言,使用标准化和自动化的 RAST 方法,在孵育 6-8 小时后可以从包含肠杆菌科的血培养物中生成一致的 AST 数据,然后在 18 小时后通过标准阅读相同的平板进行确认。

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