Knight Jesse, Baral Stefan D, Schwartz Sheree, Wang Linwei, Ma Huiting, Young Katherine, Hausler Harry, Mishra Sharmistha
MAP Centre for Urban Health Solutions, Unity Health Toronto, Canada.
Deptartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, USA.
Infect Dis Model. 2020 Aug 1;5:549-562. doi: 10.1016/j.idm.2020.07.004. eCollection 2020.
Epidemic models of sexually transmitted infections (STIs) are often used to characterize the contribution of risk groups to overall transmission by projecting the transmission population attributable fraction (tPAF) of unmet prevention and treatment needs within risk groups. However, evidence suggests that STI risk is dynamic over an individual's sexual life course, which manifests as turnover between risk groups. We sought to examine the mechanisms by which turnover influences modelled projections of the tPAF of high risk groups.
We developed a unifying, data-guided framework to simulate risk group turnover in deterministic, compartmental transmission models. We applied the framework to an illustrative model of an STI and examined the mechanisms by which risk group turnover influenced equilibrium prevalence across risk groups. We then fit a model with and without turnover to the same risk-stratified STI prevalence targets and compared the inferred level of risk heterogeneity and tPAF of the highest risk group projected by the two models.
The influence of turnover on group-specific prevalence was mediated by three main phenomena: movement of previously high risk individuals with the infection into lower risk groups; changes to herd effect in the highest risk group; and changes in the number of partnerships where transmission can occur. Faster turnover led to a smaller ratio of STI prevalence between the highest and lowest risk groups. Compared to the fitted model without turnover, the fitted model with turnover inferred greater risk heterogeneity and consistently projected a larger tPAF of the highest risk group over time.
If turnover is not captured in epidemic models, the projected contribution of high risk groups, and thus, the potential impact of prioritizing interventions to address their needs, could be underestimated. To aid the next generation of tPAF models, data collection efforts to parameterize risk group turnover should be prioritized.
性传播感染(STIs)的流行模型通常用于通过预测风险群体中未满足的预防和治疗需求的传播人群归因分数(tPAF)来表征风险群体对总体传播的贡献。然而,有证据表明,性传播感染风险在个体的性生活过程中是动态变化的,这表现为风险群体之间的更替。我们试图研究更替影响高风险群体tPAF模型预测的机制。
我们开发了一个统一的数据引导框架,以在确定性的 compartmental 传播模型中模拟风险群体更替。我们将该框架应用于一个性传播感染的示例模型,并研究了风险群体更替影响各风险群体平衡患病率的机制。然后,我们将一个有更替和没有更替的模型拟合到相同的风险分层性传播感染患病率目标上,并比较两个模型推断的风险异质性水平和最高风险群体的tPAF。
更替对特定群体患病率的影响由三个主要现象介导:先前感染的高风险个体向低风险群体的流动;最高风险群体中群体效应的变化;以及可能发生传播的性伴侣数量的变化。更替速度越快,最高和最低风险群体之间的性传播感染患病率比值越小。与没有更替的拟合模型相比,有更替的拟合模型推断出更大的风险异质性,并随着时间的推移始终预测最高风险群体的tPAF更大。
如果在流行模型中没有考虑更替,高风险群体的预测贡献,以及因此优先干预以满足其需求的潜在影响可能会被低估。为了帮助开发下一代tPAF模型,应优先进行数据收集工作以参数化风险群体更替。