Department of Computer Science, Stanford University, Stanford, CA, USA.
Microsoft Research, Cambridge, MA, USA.
Nature. 2021 Jan;589(7840):82-87. doi: 10.1038/s41586-020-2923-3. Epub 2020 Nov 10.
The coronavirus disease 2019 (COVID-19) pandemic markedly changed human mobility patterns, necessitating epidemiological models that can capture the effects of these changes in mobility on the spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Here we introduce a metapopulation susceptible-exposed-infectious-removed (SEIR) model that integrates fine-grained, dynamic mobility networks to simulate the spread of SARS-CoV-2 in ten of the largest US metropolitan areas. Our mobility networks are derived from mobile phone data and map the hourly movements of 98 million people from neighbourhoods (or census block groups) to points of interest such as restaurants and religious establishments, connecting 56,945 census block groups to 552,758 points of interest with 5.4 billion hourly edges. We show that by integrating these networks, a relatively simple SEIR model can accurately fit the real case trajectory, despite substantial changes in the behaviour of the population over time. Our model predicts that a small minority of 'superspreader' points of interest account for a large majority of the infections, and that restricting the maximum occupancy at each point of interest is more effective than uniformly reducing mobility. Our model also correctly predicts higher infection rates among disadvantaged racial and socioeconomic groups solely as the result of differences in mobility: we find that disadvantaged groups have not been able to reduce their mobility as sharply, and that the points of interest that they visit are more crowded and are therefore associated with higher risk. By capturing who is infected at which locations, our model supports detailed analyses that can inform more-effective and equitable policy responses to COVID-19.
2019 年冠状病毒病(COVID-19)大流行显著改变了人类的流动模式,需要建立能够捕捉这些流动变化对严重急性呼吸系统综合征冠状病毒 2(SARS-CoV-2)传播影响的流行病学模型。在这里,我们引入了一个元种群易感-暴露-感染-消除(SEIR)模型,该模型整合了精细的动态流动网络,以模拟 SARS-CoV-2 在美国十大最大都市地区的传播。我们的流动网络来自移动电话数据,描绘了 9800 万人从邻里(或普查街区组)到如餐馆和宗教场所等兴趣点的每小时移动情况,将 56945 个普查街区组与 552758 个兴趣点以及 54 亿个每小时的边连接起来。我们表明,通过整合这些网络,一个相对简单的 SEIR 模型可以准确拟合实际案例轨迹,尽管人口行为随时间发生了重大变化。我们的模型预测,少数“超级传播者”兴趣点占大多数感染病例,限制每个兴趣点的最大占用率比统一降低流动性更有效。我们的模型还正确预测了劣势种族和社会经济群体的感染率更高,仅仅是因为流动性的差异:我们发现,弱势群体无法像以前那样大幅度降低他们的流动性,而且他们访问的兴趣点更拥挤,因此与更高的风险相关。通过捕捉在哪些地点感染了谁,我们的模型支持详细的分析,可以为 COVID-19 提供更有效和公平的政策应对。