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喉鳞状细胞癌的潜在分子机制和转录因子标志物的鉴定。

The underlying molecular mechanism and identification of transcription factor markers for laryngeal squamous cell carcinoma.

机构信息

Department of Otolaryngology, Liuzhou People's Hospital of Guangxi , Liuzhou, Guangxi Zhuang Autonomous Region, P.R. China.

Department of Radiotherapy, First Affiliated Hospital of Guangxi Medical University , Nanning, Guangxi Zhuang Autonomous Region, P.R. China.

出版信息

Bioengineered. 2021 Dec;12(1):208-224. doi: 10.1080/21655979.2020.1862527.

Abstract

The screening and treatment of laryngeal squamous cell carcinoma (LSCC) still perplexes clinicians, making it necessary to explore new markers. To this end, this research examined the underlying molecular mechanism of LSCC based on high-throughput datasets ( = 249) from multiple databases. It also identified transcription factors (TFs) independently associated with LSCC prognosis. Through Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses, differential expression genes of LSCC were deemed relevant to the extracellular matrix and its related structures or pathways, suggesting that the extracellular matrix plays an important role in LSCC. At the same time, several hub genes that may also have important roles in LSCC were identified via protein-protein interaction analysis, including and . Eight unreported LSCC prognostic TFs - and - were screened via Kaplan-Meier curves. Cox analysis determined for the first time that expression and gender were independently associated with LSCC prognosis. Compared to control tissues, elevated expression of was found in LSCC tissues (standardized mean difference = 0.44, 95% confidence interval [0.13-0.76]). expression also makes it feasible to screen LSCC from non-LSCC (area under the curve = 0.77), and may play an essential role in LSCC by regulating . In conclusion, may be a novel marker for LSCC clinical screening and treatment.

摘要

喉鳞状细胞癌(LSCC)的筛查和治疗仍然困扰着临床医生,因此有必要探索新的标志物。为此,本研究基于来自多个数据库的高通量数据集(=249),探讨了 LSCC 的潜在分子机制。还确定了与 LSCC 预后独立相关的转录因子(TFs)。通过基因本体论和京都基因与基因组百科全书分析,LSCC 的差异表达基因与细胞外基质及其相关结构或途径相关,表明细胞外基质在 LSCC 中起重要作用。同时,通过蛋白质-蛋白质相互作用分析,还确定了几个可能在 LSCC 中也具有重要作用的枢纽基因,包括和。通过 Kaplan-Meier 曲线筛选出 8 个未报道的 LSCC 预后 TF-和。Cox 分析首次确定表达和性别与 LSCC 预后独立相关。与对照组织相比,LSCC 组织中发现表达升高(标准化均数差=0.44,95%置信区间[0.13-0.76])。表达也使得从非 LSCC 中筛选 LSCC 成为可能(曲线下面积=0.77),并且可能通过调节来在 LSCC 中发挥重要作用。总之,可能是 LSCC 临床筛查和治疗的新型标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/675b/8291796/bb04221f0449/KBIE_A_1862527_F0001_OC.jpg

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