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罂粟科(Papaveraceae)传统藏药的完整叶绿体基因组。

Complete chloroplast genome of the (Papaveraceae), a traditional medicine of Tibetan.

作者信息

Xu Bei, Kang Hengbo, Luo Shengxiang, Yang Qian, Zhao Zhe, Peng Fangfang, Liu Zhan-Lin

机构信息

Key Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Sciences, Northwest University, Xi'an, China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2335-2336. doi: 10.1080/23802359.2019.1629343.

Abstract

As a medicinal herb of Tibetan, is often utilized for treating pneumonia. In this study, the complete chloroplast genome of was determined by next-generation sequencing technology. The overall genome was 154,997 bp in size, including a large single copy (LSC), a small single copy (SSC) and two inverted repeat (IR) regions, which were 85,153 bp, 17,876 bp, and 25,984 bp in length, respectively. The circular chloroplast genome owned 129 genes, comprising 84 protein-coding genes, 8 ribosomal RNA genes (four rRNA species), and 37 transfer RNA genes. The GC contents of the entire sequence, LSC, SSC, and IR region were 38.5%, 37.1%, 32.8%, and 43%, separately. The maximum likelihood tree revealed that was closely related to with strong support value.

摘要

作为一种藏药,常用于治疗肺炎。在本研究中,采用下一代测序技术测定了其完整的叶绿体基因组。整个基因组大小为154,997 bp,包括一个大单拷贝(LSC)、一个小单拷贝(SSC)和两个反向重复(IR)区域,长度分别为85,153 bp、17,876 bp和25,984 bp。环状叶绿体基因组拥有129个基因,包括84个蛋白质编码基因、8个核糖体RNA基因(4种rRNA)和37个转运RNA基因。整个序列、LSC、SSC和IR区域的GC含量分别为38.5%、37.1%、32.8%和43%。最大似然树显示,其与具有很强支持值的[物种名称]密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/433e/7687438/dd91730348a7/TMDN_A_1629343_F0001_B.jpg

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