锦葵科某濒危植物物种的完整叶绿体基因组序列
Complete chloroplast genome sequence of (Malvaceae): an endangered plant species.
作者信息
Zhao Kun-Kun, Wang Jian-Hua, Cai Ya-Cheng, Zhu Zhi-Xin, López-Pujol Jordi, Wang Hua-Feng
机构信息
Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Institute of Tropical Agriculture and Forestry, Hainan University, Haikou, China.
State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-Sen University, Guangzhou, China.
出版信息
Mitochondrial DNA B Resour. 2018 Feb 1;3(1):141-142. doi: 10.1080/23802359.2017.1422398.
(Malvaceae) is an evergreen tree distributed in the Chinese provinces of Hainan and Yunnan and in Cambodia. In China, it is listed as 'Endangered' (EN) , although it is not protected by law. The complete chloroplast (cp) genome sequence of this threatened species is reported in this study, based on high-throughput sequencing (Illumina). The complete cp genome is 168, 953 bp in length, containing a pair of inverted repeat regions (IRs) of 34,491 bp, a large single copy (LSC) region of 89,054 bp, and a small single copy (SSC) region of 10,917 bp. The cp genome contains 129 genes, consisting of 85 protein-coding genes, 36 tRNA genes and eight rRNA genes. The overall AT content in the cp genome of is 63.2%. The phylogenetic analyses indicate that there is a close relationship between and .
（锦葵科）是一种常绿乔木，分布于中国海南省和云南省以及柬埔寨。在中国，它被列为“濒危”（EN）物种，尽管不受法律保护。本研究基于高通量测序（Illumina）报道了这种濒危物种的完整叶绿体（cp）基因组序列。完整的cp基因组长度为168,953 bp，包含一对长度为34,491 bp的反向重复区域（IRs）、一个长度为89,054 bp的大单拷贝（LSC）区域和一个长度为10,917 bp的小单拷贝（SSC）区域。cp基因组包含129个基因，由85个蛋白质编码基因、36个tRNA基因和8个rRNA基因组成。该物种cp基因组的总体AT含量为63.2%。系统发育分析表明，该物种与[具体物种未给出]之间存在密切关系。
Zotero 插件