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一种韩国特有植物金英一和金英德(虎耳草科)的完整叶绿体基因组。

The complete chloroplast genome of a Korean endemic plant Y.I. Kim & Y.D. Kim (Saxifragaceae).

作者信息

Kim Yong-In, Lee Jung-Hoon, Kim Young-Dong

机构信息

International Biological Material Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Korea.

Department of Life Science, Hallym University, Chuncheon, Korea.

出版信息

Mitochondrial DNA B Resour. 2018 Mar 16;3(1):380-381. doi: 10.1080/23802359.2018.1450668.

Abstract

is endemic to Korea. This species is primarily found in Gyeonggi Province and Gangwon Province in the central part of the Korean Peninsula. The complete chloroplast genome (cpDNA) sequence of was characterized using Illumina paired-end sequencing. The cpDNA is 153,102 bp in length and contains a pair of 26,017-bp inverted repeats (IRs), a large single copy (LSC) region of 83,752 bp, and a small single copy (SSC) region of 17,316 bp. It contains 131 genes, including 84 protein-coding genes (78 PCG species), eight ribosomal RNA genes (four RNA species), 37 transfer RNA genes (30 tRNA species), and one pseudogene (accD). The overall G + C content of the whole genome is 37.3%. Phylogenetic analysis based on 24 chloroplast genomes indicates that is closely related to

摘要

原产于韩国。该物种主要分布在朝鲜半岛中部的京畿道和江原道。利用Illumina双端测序对其完整叶绿体基因组(cpDNA)序列进行了表征。cpDNA长度为153,102 bp,包含一对26,017 bp的反向重复序列(IRs)、一个83,752 bp的大单拷贝(LSC)区域和一个17,316 bp的小单拷贝(SSC)区域。它包含131个基因,包括84个蛋白质编码基因(78个PCG物种)、8个核糖体RNA基因(4个RNA物种)、37个转移RNA基因(30个tRNA物种)和一个假基因(accD)。全基因组的总体G + C含量为37.3%。基于24个叶绿体基因组的系统发育分析表明,它与……密切相关

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