Tao Ping, Hong Liang, Tang Wenqing, Lu Qun, Zhao Yanrong, Zhang Si, Ma Lijie, Xue Ruyi
Department of Laboratory Medicine, Shanghai TCM-Integrated Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai, China.
Department of General Surgery, Shanghai Fifth People's Hospital, Fudan University, Shanghai, China.
Front Oncol. 2021 Jan 22;10:574778. doi: 10.3389/fonc.2020.574778. eCollection 2020.
Therapies targeting immune molecules have rapidly been adopted and advanced the treatment of hepatocellular carcinoma (HCC). Nonetheless, no studies have reported a systematic analysis between immunological profiles and clinical significance in HCC.
We comprehensively investigated immune patterns and systematically correlated 22 types of both adaptive and innate immune cells with genomic characteristics and clinical outcomes based on 370 HCC patients from The Cancer Genome Atlas (TCGA) database through a metagene approach (known as CIBERSORT). Based on the coupled with integrated high-dimensional bioinformatics analysis, we further independently validated six immune subsets (CD4 T cells, CD8 T cells, CD20 B cells, CD14 monocytes, CD56 NK cells, and CD68 macrophages), and shortlisted three (CD4 T cells, CD8 T cells, and CD56 NK cells) of which to investigate their association with clinical outcomes in two independent Zhongshan cohorts of HCC patients (n = 258 and n = 178). Patient prognosis was further evaluated by Kaplan-Meier analysis and univariate and multivariate regression analysis.
By using the CIBERSORT method, the immunome landscape of HCC was constructed based on integrated transcriptomics analysis and multiplexed sequential immunohistochemistry. Further, the patients were categorized into four immune subgroups featured with distinct clinical outcomes. Strikingly, significant inter-tumoral and intra-tumoral immune heterogeneity was further identified according to the in-depth interrogation of the immune landscape.
This work represents a potential useful resource for the immunoscore establishment for prognostic prediction in HCC patients.
针对免疫分子的疗法已迅速被采用,并推动了肝细胞癌(HCC)的治疗进展。尽管如此,尚无研究报道过对HCC免疫特征与临床意义之间进行系统分析。
我们基于来自癌症基因组图谱(TCGA)数据库的370例HCC患者,通过元基因方法(称为CIBERSORT)全面研究了免疫模式,并系统地将22种适应性和先天性免疫细胞类型与基因组特征及临床结局相关联。结合综合的高维生物信息学分析,我们进一步独立验证了六个免疫亚群(CD4 T细胞、CD8 T细胞、CD20 B细胞、CD14单核细胞、CD56 NK细胞和CD68巨噬细胞),并筛选出其中三个(CD4 T细胞、CD8 T细胞和CD56 NK细胞)来研究它们与两个独立的中山HCC患者队列(n = 258和n = 178)临床结局的关联。通过Kaplan-Meier分析以及单变量和多变量回归分析进一步评估患者预后。
通过使用CIBERSORT方法,基于综合转录组学分析和多重序列免疫组织化学构建了HCC的免疫图谱。此外,患者被分为四个具有不同临床结局的免疫亚组。引人注目的是,根据对免疫图谱的深入研究,进一步确定了显著的肿瘤间和肿瘤内免疫异质性。
这项工作为建立用于HCC患者预后预测的免疫评分提供了潜在的有用资源。