Department of Chemical and Biomolecular Engineering, University of California-Berkeley, Berkeley, USA.
Department of Chemical and Biological Engineering, Northwestern University, Evanston, IL, 60208, USA.
Microb Cell Fact. 2021 Feb 15;20(1):44. doi: 10.1186/s12934-021-01536-z.
Protein secretion in bacteria is an attractive strategy for heterologous protein production because it retains the high titers and tractability of bacterial hosts while simplifying downstream processing. Traditional intracellular production strategies require cell lysis and separation of the protein product from the chemically similar cellular contents, often a multi-step process that can include an expensive refolding step. The type III secretion system of Salmonella enterica Typhimurium transports proteins from the cytoplasm to the extracellular environment in a single step and is thus a promising solution for protein secretion in bacteria. Product titer is sensitive to extracellular environmental conditions, however, and T3SS regulation is integrated with essential cellular functions. Instead of attempting to untangle a complex web of regulatory input, we took an "outside-in" approach to elucidate the effect of growth medium components on secretion titer.
We dissected the individual and combined effects of carbon sources, buffers, and salts in a rich nutrient base on secretion titer. Carbon sources alone decreased secretion titer, secretion titer increased with salt concentration, and the combination of a carbon source, buffer, and high salt concentration had a synergistic effect on secretion titer. Transcriptional activity measured by flow cytometry showed that medium composition affected secretion system activity, and prolonged secretion system activation correlated strongly with increased secretion titer. We found that an optimal combination of glycerol, phosphate, and sodium chloride provided at least a fourfold increase in secretion titer for a variety of proteins. Further, the increase in secretion titer provided by the optimized medium was additive with strain enhancements.
We leveraged the sensitivity of the type III secretion system to the extracellular environment to increase heterologous protein secretion titer. Our results suggest that maximizing secretion titer via the type III secretion system is not as simple as maximizing secreted protein expression-one must also optimize secretion system activity. This work advances the type III secretion system as a platform for heterologous protein secretion in bacteria and will form a basis for future engineering efforts.
在细菌中进行蛋白质分泌是一种有吸引力的异源蛋白生产策略,因为它保留了细菌宿主的高滴度和易处理性,同时简化了下游处理。传统的细胞内生产策略需要细胞裂解,并将蛋白质产物与化学上相似的细胞内容物分离,通常是一个多步骤的过程,其中可能包括昂贵的重折叠步骤。沙门氏菌 Typhimurium 的 III 型分泌系统将蛋白质从细胞质一步运送到细胞外环境,因此是细菌中蛋白质分泌的一种很有前途的解决方案。然而,产物滴度对细胞外环境条件敏感,并且 T3SS 调节与必要的细胞功能集成在一起。我们没有试图理清复杂的调控输入网络,而是采用了一种“从外到内”的方法来阐明生长培养基成分对分泌滴度的影响。
我们分别和组合研究了丰富营养基底中的碳源、缓冲液和盐对分泌滴度的影响。单独的碳源降低了分泌滴度,随着盐浓度的增加分泌滴度增加,碳源、缓冲液和高盐浓度的组合对分泌滴度有协同作用。流式细胞术测量的转录活性表明,培养基成分影响分泌系统的活性,并且延长分泌系统的激活与分泌滴度的增加密切相关。我们发现,甘油、磷酸盐和氯化钠的最佳组合至少使各种蛋白质的分泌滴度增加了四倍。此外,优化培养基提供的分泌滴度增加与菌株增强作用相加。
我们利用 III 型分泌系统对细胞外环境的敏感性来提高异源蛋白的分泌滴度。我们的结果表明,通过 III 型分泌系统最大化分泌滴度并不像最大化分泌蛋白表达那样简单-还必须优化分泌系统的活性。这项工作推进了 III 型分泌系统作为细菌中异源蛋白分泌的平台,并将为未来的工程努力奠定基础。