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裸鼹鼠基因组中活跃的 LINE-1 特征。

Characterization of an active LINE-1 in the naked mole-rat genome.

机构信息

Division of Virology, Department of Microbiology and Immunology, Osaka University Graduate School of Medicine, 2-2 Yamada-oka, Suita, Osaka, 565-0871, Japan.

Laboratory of RNA Viruses, Department of Virus Research, Institute for Frontier Life and Medical Sciences (InFRONT), Kyoto University, Kyoto, Japan.

出版信息

Sci Rep. 2021 Mar 11;11(1):5725. doi: 10.1038/s41598-021-84962-8.

Abstract

Naked mole-rats (NMRs, Heterocephalus glaber) are the longest-living rodent species. A reason for their long lifespan is pronounced cancer resistance. Therefore, researchers believe that NMRs have unknown secrets of cancer resistance and seek to find them. Here, to reveal the secrets, we noticed a retrotransposon, long interspersed nuclear element 1 (L1). L1s can amplify themselves and are considered endogenous oncogenic mutagens. Since the NMR genome contains fewer L1-derived sequences than other mammalian genomes, we reasoned that the retrotransposition activity of L1s in the NMR genome is lower than those in other mammalian genomes. In this study, we successfully cloned an intact L1 from the NMR genome and named it NMR-L1. An L1 retrotransposition assay using the NMR-L1 reporter revealed that NMR-L1 was active retrotransposon, but its activity was lower than that of human and mouse L1s. Despite lower retrotrasposition activity, NMR-L1 was still capable of inducing cell senescence, a tumor-protective system. NMR-L1 required the 3' untranslated region (UTR) for retrotransposition, suggesting that NMR-L1 is a stringent-type of L1. We also confirmed the 5' UTR promoter activity of NMR-L1. Finally, we identified the G-quadruplex structure of the 3' UTR, which modulated the retrotransposition activity of NMR-L1. Taken together, the data indicate that NMR-L1 retrotranspose less efficiently, which may contribute to the cancer resistance of NMRs.

摘要

裸鼹鼠(NMRs,Heterocephalus glaber)是寿命最长的啮齿动物。它们长寿的一个原因是具有明显的抗癌能力。因此,研究人员认为 NMRs 具有未知的抗癌秘密,并试图找到这些秘密。在这里,为了揭示这些秘密,我们注意到一种逆转录转座子,长散在核元件 1(L1)。L1 可以自我扩增,被认为是内源性致癌突变原。由于 NMR 基因组中 L1 衍生序列的数量少于其他哺乳动物基因组,我们推断 NMR 基因组中 L1 的逆转录转座活性低于其他哺乳动物基因组。在这项研究中,我们成功地从 NMR 基因组中克隆了一个完整的 L1,并将其命名为 NMR-L1。使用 NMR-L1 报告基因的 L1 逆转录转座测定表明,NMR-L1 是一种活跃的逆转录转座子,但它的活性低于人类和小鼠 L1。尽管逆转录转座活性较低,NMR-L1 仍能诱导细胞衰老,这是一种肿瘤保护系统。NMR-L1 逆转录转座需要 3'非翻译区(UTR),表明 NMR-L1 是一种严格型的 L1。我们还证实了 NMR-L1 的 5'UTR 启动子活性。最后,我们确定了 3'UTR 的 G-四链体结构,该结构调节了 NMR-L1 的逆转录转座活性。总之,这些数据表明 NMR-L1 的逆转录转座效率较低,这可能有助于 NMRs 的抗癌能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af24/7952902/ee5bb1772356/41598_2021_84962_Fig1_HTML.jpg

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