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酰胺水解酶的结构。来自谷氨酰胺产不动杆菌的谷氨酰胺酶 - 天冬酰胺酶的氨基酸序列以及来自菊欧文氏菌的天冬酰胺酶的初步晶体学数据。

Structures of amidohydrolases. Amino acid sequence of a glutaminase-asparaginase from Acinetobacter glutaminasificans and preliminary crystallographic data for an asparaginase from Erwinia chrysanthemi.

作者信息

Tanaka S, Robinson E A, Appella E, Miller M, Ammon H L, Roberts J, Weber I T, Wlodawer A

机构信息

Laboratory of Cell Biology, National Cancer Institute, Bethesda, Maryland 20205.

出版信息

J Biol Chem. 1988 Jun 25;263(18):8583-91.

PMID:3379033
Abstract

The complete amino acid sequence of a glutaminase-asparaginase from Acinetobacter glutaminasificans, for which a preliminary tertiary structure is available from crystallographic analysis, has been determined by automated Edman degradation of fragments produced by chemical and proteolytic cleavages. The protein consists of 331 amino acid residues and has a molecular weight of 35,500. The pattern of hydrophilic and hydrophobic regions is typical of a globular protein. A new crystal form of an Erwinia chrysanthemi 1125 asparaginase is reported. The space group is monoclinic C2, with unit cell parameters of: a = 107.8, b = 91.7, c = 129.2 A and beta = 91.7 degrees. A Vm of 2.25 A3/dalton was calculated for one tetramer of 35,100-dalton subunits per asymmetric unit. X-ray intensity data have been obtained to 2.2 A resolution. The point group symmetry of the Er. chrysanthemi tetramer is 222 from self-rotation function calculations. The relative orientations of an A. glutaminasificans glutaminase-asparaginase model and the Er. chrysanthemi asparaginase tetramer have been determined with the cross-rotation function, and translation function calculations have revealed a plausible location for the asparaginase tetramer in the crystal.

摘要

已通过对化学和蛋白酶裂解产生的片段进行自动埃德曼降解,确定了来自谷氨酰胺酶产生不动杆菌的谷氨酰胺酶 - 天冬酰胺酶的完整氨基酸序列,其初步三级结构可通过晶体学分析获得。该蛋白质由331个氨基酸残基组成,分子量为35,500。亲水和疏水区域的模式是球状蛋白质的典型模式。报道了菊欧文氏菌1125天冬酰胺酶的一种新晶体形式。空间群为单斜C2,晶胞参数为:a = 107.8,b = 91.7,c = 129.2 Å,β = 91.7°。计算出每个不对称单元中35,100道尔顿亚基的一个四聚体的Vm为2.25 ų/道尔顿。已获得分辨率为2.2 Å的X射线强度数据。通过自旋转函数计算,菊欧文氏菌四聚体的点群对称性为222。已用交叉旋转函数确定了谷氨酰胺酶产生不动杆菌谷氨酰胺酶 - 天冬酰胺酶模型与菊欧文氏菌天冬酰胺酶四聚体的相对取向,平移函数计算揭示了天冬酰胺酶四聚体在晶体中的一个合理位置。

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