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识别与分析……中的家族

Identification and Analysis of Family in .

作者信息

Zhu Wenpeng, Zhang Manyu, Li Jianyi, Zhao Hewen, Ge Wei, Zhang Kezhong

机构信息

Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing University of Agriculture, Beijing, People's Republic of China.

College of Landscape Architecture, Beijing University of Agriculture, Beijing, People's Republic of China.

出版信息

Evol Bioinform Online. 2021 Apr 12;17:1176934321994127. doi: 10.1177/1176934321994127. eCollection 2021.

Abstract

The phytohormone auxin are important in all aspects of plant growth and development. The () gene responds to auxin induction as auxin early response gene family. Despite the physiological importance of the gene, a systematic analysis of the gene in has not been reported. This paper describes the characterization of genes at the transcriptomic level and genes at the genomic level, with 17 genes and 23 genes identified. Phylogenetic analysis shows that and family genes can be subdivided into 4 groups and show strong evolutionary conservatism. Quantitative real-time polymerase chain reaction (qRT-PCR) was used to test the expression profile of genes in different tissues under indole-3-acetic acid (IAA) treatment. Most genes are responsive to exogenous auxin and have tissue-specific expression. Overall, these results will provide molecular-level insights into auxin metabolism, transport, and signaling in species.

摘要

植物激素生长素在植物生长发育的各个方面都很重要。()基因作为生长素早期反应基因家族对生长素诱导作出响应。尽管该基因具有生理重要性,但尚未有关于该基因在(植物名称未补全)中的系统分析报道。本文描述了在转录组水平上(基因名称未补全)基因以及在基因组水平上(基因名称未补全)基因的特征,共鉴定出17个(基因名称未补全)基因和23个(基因名称未补全)基因。系统发育分析表明,(基因名称未补全)和(基因名称未补全)家族基因可分为4组,并表现出强烈的进化保守性。采用定量实时聚合酶链反应(qRT-PCR)检测吲哚-3-乙酸(IAA)处理下不同组织中(基因名称未补全)基因的表达谱。大多数(基因名称未补全)基因对外源生长素作出响应,并具有组织特异性表达。总体而言,这些结果将为(植物名称未补全)物种中生长素代谢、运输和信号传导提供分子水平的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3b3/8044571/ee12669e91bc/10.1177_1176934321994127-fig1.jpg

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