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在谷物中,用于抗菌防御化合物的多基因途径的端粒组装。

Subtelomeric assembly of a multi-gene pathway for antimicrobial defense compounds in cereals.

机构信息

National Centre for Gene Research, CAS-JIC Centre of Excellence for Plant and Microbial Science (CEPAMS), Centre of Excellence for Molecular Plant Sciences, Shanghai Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences (CAS), Shanghai, China.

John Innes Centre, Norwich Research Park, Norwich, UK.

出版信息

Nat Commun. 2021 May 7;12(1):2563. doi: 10.1038/s41467-021-22920-8.

Abstract

Non-random gene organization in eukaryotes plays a significant role in genome evolution. Here, we investigate the origin of a biosynthetic gene cluster for production of defence compounds in oat-the avenacin cluster. We elucidate the structure and organisation of this 12-gene cluster, characterise the last two missing pathway steps, and reconstitute the entire pathway in tobacco by transient expression. We show that the cluster has formed de novo since the divergence of oats in a subtelomeric region of the genome that lacks homology with other grasses, and that gene order is approximately colinear with the biosynthetic pathway. We speculate that the positioning of the late pathway genes furthest away from the telomere may mitigate against a 'self-poisoning' scenario in which toxic intermediates accumulate as a result of telomeric gene deletions. Our investigations reveal a striking example of adaptive evolution underpinned by remarkable genome plasticity.

摘要

真核生物中非随机的基因组织在基因组进化中起着重要作用。在这里,我们研究了燕麦防御化合物生物合成基因簇的起源 - 燕麦素基因簇。我们阐明了这个 12 基因簇的结构和组织,表征了最后两个缺失的途径步骤,并通过瞬时表达在烟草中重新构建了整个途径。我们表明,该基因簇是在燕麦分化后在基因组的端粒附近的一个区域内从头形成的,该区域与其他草类没有同源性,并且基因顺序与生物合成途径大致线性一致。我们推测,最远离端粒的晚期途径基因的定位可能减轻了由于端粒基因缺失而导致毒性中间产物积累的“自我中毒”情况。我们的研究揭示了一个引人注目的适应性进化的例子,其基础是显著的基因组可塑性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7a06/8105312/cf7ab0636498/41467_2021_22920_Fig1_HTML.jpg

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