Department of Chemistry and Polymer Science, Stellenbosch University, Private Bag, Matieland 7600, South Africa.
Department of Chemistry, University of Cape Town, Private Bag, Rondebosch 7701, South Africa.
Acc Chem Res. 2021 Jun 1;54(11):2649-2659. doi: 10.1021/acs.accounts.1c00154. Epub 2021 May 13.
Over the last century, malaria deaths have decreased by more than 85%. Nonetheless, there were 405 000 deaths in 2018, mostly resulting from infection. In the 21st century, much of the advance has arisen from the deployment of insecticide-treated bed nets and artemisinin combination therapy. However, over the past few decades parasites with a delayed artemisinin clearance phenotype have appeared in Southeast Asia, threatening further gains. The effort to find new drugs is thus urgent. A prominent process in blood stage malaria parasites, which we contend remains a viable drug target, is hemozoin formation. This crystalline material consisting of heme can be readily seen when parasites are viewed microscopically. The process of its formation in the parasite, however, is still not fully understood.In early work, we recognized hemozoin formation as a biomineralization process. We have subsequently investigated the kinetics of synthetic hemozoin (β-hematin) crystallization catalyzed at lipid-aqueous interfaces under biomimetic conditions. This led us to the use of neutral detergent-based high-throughput screening (HTS) for inhibitors of β-hematin formation. A good hit rate against malaria parasites was obtained. Simultaneously, we developed a pyridine-based assay which proved successful in measuring the concentrations of hematin not converted to β-hematin.The pyridine assay was adapted to determine the effects of chloroquine and other clinical antimalarials on hemozoin formation in the cell. This permitted the determination of the dose-dependent amounts of exchangeable heme and hemozoin in for the first time. These studies have shown that hemozoin inhibitors cause a dose-dependent increase in exchangeable heme, correlated with decreased parasite survival. Electron spectroscopic imaging (ESI) showed a relocation of heme iron into the parasite cytoplasm, while electron microscopy provided evidence of the disruption of hemozoin crystals. This cellular assay was subsequently extended to top-ranked hits from a wide range of scaffolds found by HTS. Intriguingly, the amounts of exchangeable heme at the parasite growth IC values of these scaffolds showed substantial variation. The amount of exchangeable heme was found to be correlated with the amount of inhibitor accumulated in the parasitized red blood cell. This suggests that heme-inhibitor complexes, rather than free heme, lead to parasite death. This was supported by ESI using a Br-containing compound which showed the colocalization of Fe and Br as well as by confocal Raman microscopy which confirmed the presence of a complex in the parasite. Current evidence indicates that inhibitors block hemozoin formation by surface adsorption. Indeed, we have successfully introduced molecular docking with hemozoin to find new inhibitors. It follows that the resulting increase in free heme leads to the formation of the parasiticidal heme-inhibitor complex. We have reported crystal structures of heme-drug complexes for several aryl methanol antimalarials in nonaqueous media. These form coordination complexes but most other inhibitors interact noncovalently, and the determination of their structures remains a major challenge.It is our view that key future developments will include improved assays to measure cellular heme levels, better in silico approaches for predicting β-hematin inhibition, and a concerted effort to determine the structure and properties of heme-inhibitor complexes.
在过去的一个世纪里,疟疾死亡人数减少了 85%以上。尽管如此,2018 年仍有 40.5 万人死亡,主要是由 感染造成的。在 21 世纪,大部分进展来自于使用驱虫蚊帐和青蒿素联合疗法。然而,在过去几十年里,东南亚出现了青蒿素清除表型延迟的寄生虫,这威胁到了进一步的进展。因此,寻找新药的工作迫在眉睫。在血液阶段疟原虫中存在一个突出的过程,我们认为这仍然是一个可行的药物靶点,即血卟啉的形成。当寄生虫在显微镜下观察时,可以很容易地看到这种由血红素组成的结晶物质。然而,其在寄生虫中的形成过程仍不完全清楚。在早期的工作中,我们将血卟啉的形成识别为一个生物矿化过程。随后,我们研究了在仿生条件下,脂质-水界面催化的合成血卟啉(β-血卟啉)结晶的动力学。这导致我们使用基于中性去污剂的高通量筛选(HTS)来寻找β-血卟啉形成的抑制剂。我们得到了对抗疟原虫的良好命中率。同时,我们开发了一种基于吡啶的测定方法,该方法成功地测量了未转化为 β-血卟啉的血红素浓度。该吡啶测定法被改编用于测定氯喹和其他临床抗疟药对细胞中血卟啉形成的影响。这使得我们首次能够确定 中可交换的血红素和血卟啉的剂量依赖性含量。这些研究表明,血卟啉抑制剂会导致可交换血红素的剂量依赖性增加,与寄生虫存活率降低相关。电子能谱成像(ESI)显示血红素铁重新定位到寄生虫细胞质中,而电子显微镜提供了血卟啉晶体被破坏的证据。随后,该细胞测定法被扩展到 HTS 发现的各种支架的排名靠前的命中物。有趣的是,这些支架在寄生虫生长 IC 值下的可交换血红素含量有很大的差异。可交换血红素的含量与寄生虫内积累的抑制剂含量相关。这表明血红素-抑制剂复合物,而不是游离血红素,导致寄生虫死亡。ESI 用含 Br 的化合物支持了这一点,该化合物显示了 Fe 和 Br 的共定位,共焦拉曼显微镜也证实了寄生虫中存在复合物。目前的证据表明,抑制剂通过表面吸附阻止血卟啉的形成。事实上,我们已经成功地引入了与血卟啉的分子对接,以寻找新的抑制剂。因此,游离血红素的增加导致了寄生虫杀伤血红素-抑制剂复合物的形成。我们已经报道了几种芳基甲醇类抗疟药物在非水介质中的血红素-药物复合物的晶体结构。这些形成配位复合物,但大多数其他抑制剂以非共价方式相互作用,其结构的确定仍然是一个主要挑战。我们认为,未来的关键发展将包括改进的测定方法来测量细胞内血红素水平、更好的预测β-血卟啉抑制的计算方法以及协同努力来确定血红素-抑制剂复合物的结构和性质。