Technische Universität München, Physik Department, Center for Functional Protein Assemblies (CPA), Ernst-Otto-Fischer-Str. 8, D-85748 Garching, Germany.
Center for Interdisciplinary Biosciences, Technology and Innovation Park, P.J. Šafárik University, Trieda SNP 1, 040 11Košice, Slovakia.
J Phys Chem B. 2021 Aug 12;125(31):8712-8721. doi: 10.1021/acs.jpcb.1c03648. Epub 2021 Jul 19.
Prolyl isomerization is recognized as one of the key regulatory mechanisms, which plays a crucial role in cell signaling, ion channel gating, phage virus infection, and molecular timing. This isomerization is usually slow but often accelerated by an enzyme, called peptidyl-prolyl isomerase (PPIase). In the current project, we investigate using single-molecule force spectroscopy (SMFS) the impact of a bacterial PPIase, SlyD, on the isomerization of the proline 2225 (P2225) in an isolated 20th domain of a cytoskeletal mechanosensing protein filamin-A (FlnA20). To explore the FlnA20-PPIase interaction, we have used multiple SMFS modes, like constant velocity, constant distance, and jumping trap experiments. In our previous study, we reported the unique nature of the P2225, which is conserved in all naturally occurring filamins and can slowly (minutes) interconvert between isomers, in absence of any PPIase. Our current results show a staggering 25-fold acceleration of the -to- isomerization rate in the presence of saturating SlyD concentration (7.25 μM) compared to the unenzymatic condition. A SlyD concentration-dependent depletion of the isomeric lifetime was also observed. Additionally, we observed that SlyD stabilizes the -isomer in the native state of FlnA20 by ∼2 T. This is the first single-molecule observation of the - isomerization catalysis by a PPIase in a mechanosensing protein.
脯氨酰异构化被认为是一种关键的调控机制,在细胞信号转导、离子通道门控、噬菌体病毒感染和分子计时等方面发挥着重要作用。这种异构化通常很慢,但通常会被一种称为肽基脯氨酰异构酶(PPIase)的酶加速。在当前的项目中,我们使用单分子力谱(SMFS)研究了一种细菌 PPIase,即 SlyD,对分离的细胞骨架机械传感蛋白肌联蛋白-A(FlnA20)的第 20 个结构域中脯氨酸 2225(P2225)异构化的影响。为了探索 FlnA20-PPIase 相互作用,我们使用了多种 SMFS 模式,如恒速、恒距和跳跃陷阱实验。在我们之前的研究中,我们报告了 P2225 的独特性质,它在所有天然存在的肌联蛋白中都保守,并且可以在没有任何 PPIase 的情况下缓慢(分钟级)在异构体之间相互转换。我们目前的结果表明,在存在饱和 SlyD 浓度(7.25 μM)的情况下,与非酶条件相比,-到-异构化速率惊人地加快了 25 倍。还观察到 SlyD 浓度依赖性耗尽-异构体的寿命。此外,我们还观察到 SlyD 通过约 2 T 稳定 FlnA20 中-异构体的天然状态。这是首次在机械传感蛋白中观察到 PPIase 催化-异构化的单分子观察结果。