Herzog Sebastian
Department of Developmental Immunology, Biocenter, Medical University of Innsbruck, Innsbruck, Austria.
Bio Protoc. 2018 Apr 20;8(8):e2820. doi: 10.21769/BioProtoc.2820.
This protocol describes the generation and functional validation of microRNA (miRNA) sponge or decoy constructs. When expressed from a strong promoter, these transcripts can sequester specific miRNA:RISC complexes, thereby resulting in a derepression of endogenous target mRNA. Hence, cells expressing such sponges display a partial or full miRNA loss-of-function phenotype. Depending on the sponge sequence, the activity of any miRNA of choice can be inhibited by sponge sequestration, but it should be noted that these constructs do not seem to be specific for one particular miRNA. Rather, all miRNAs of the same family as defined by the seed sequence will be affected, albeit to a different degree.
本方案描述了微小RNA(miRNA)海绵或诱饵构建体的生成及功能验证。当从强启动子表达时,这些转录本可隔离特定的miRNA:RISC复合物,从而导致内源性靶mRNA的去抑制。因此,表达此类海绵的细胞呈现部分或完全的miRNA功能丧失表型。根据海绵序列,通过海绵隔离可抑制任何所选miRNA的活性,但应注意,这些构建体似乎并非对某一特定miRNA具有特异性。相反,由种子序列定义的同一家族的所有miRNA都会受到影响,尽管程度不同。