Department of Microbiology, Chung-Ang University College of Medicine, Seoul 06974, Republic of Korea.
Department of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Republic of Korea.
Int J Syst Evol Microbiol. 2021 Jul;71(7). doi: 10.1099/ijsem.0.004904.
A Gram-stain-negative, aerobic, non-motile, rod-shaped bacterial strain (CAU 1508) was isolated from marine sediment collected in the Republic of Korea. Growth was observed at 10-45 °C (optimum, 30 °C), pH 4.0-11.0 (optimum, pH 6.0-8.0) and with 0-8.0 % (w/v) NaCl (optimum, 2-4 %). The isolate formed a monophyletic clade in the phylogenetic analyses using 16S rRNA gene and whole-genome sequences, exhibiting the highest similarity to SM1703 (96.5 %), and representing a distinct branch within the genus (family ). Its whole genome sequence was 5.59 Mb long, with a G+C content of 65.7 mol% and 2183 predicted genes belonging to six functional categories. The average nucleotide identity and digital DNA-DNA hybridization values between CAU 1508 and SM1703 were 79.1 and 22.2 %, respectively. The predominant cellular fatty acids were C cyclo 8 and summed feature 8 (C 7/C 6). The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, two unidentified phospholipids and one unidentified aminophospholipid. The sole isoprenoid quinone was ubiquinone 10. Phenotypic phylogenetic properties supported the classification of CAU 1508 as representing a novel species of the genus , with the proposed name sp. nov. The type strain is CAU 1508 (=KCTC 62999=NBRC 113697).
一株革兰氏阴性、需氧、不运动的杆状细菌(CAU 1508)从韩国海洋沉积物中分离得到。在 10-45°C(最佳温度 30°C)、pH 值 4.0-11.0(最佳 pH 值 6.0-8.0)和 0-8.0%(w/v)NaCl(最佳 2-4%)的条件下观察到生长。该分离株在基于 16S rRNA 基因和全基因组序列的系统发育分析中形成一个单系分支,与 SM1703(96.5%)的相似度最高,代表属内的一个独特分支。其全基因组序列长 5.59Mb,G+C 含量为 65.7mol%,预测有 2183 个基因,分为 6 个功能类。CAU 1508 和 SM1703 之间的平均核苷酸同一性和数字 DNA-DNA 杂交值分别为 79.1%和 22.2%。主要的细胞脂肪酸为 C 环 8 和总和特征 8(C 7/C 6)。主要的极性脂为双磷脂酰甘油、磷脂酰甘油、磷脂酰胆碱、磷脂酰乙醇胺、两种未鉴定的磷脂和一种未鉴定的氨基磷脂。唯一的异戊二烯醌是泛醌 10。表型系统发育特性支持 CAU 1508 作为属的一个新种的分类,建议命名为 sp. nov.。模式菌株为 CAU 1508(=KCTC 62999=NBRC 113697)。