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海洋转录组学分析鉴定新型抗菌肽

Marine Transcriptomics Analysis for the Identification of New Antimicrobial Peptides.

机构信息

Biologie des Organismes et Ecosystèmes Aquatiques (BOREA) Muséum National d'Histoire Naturelle, Sorbonne Université, Université de Caen-Normandie, Université des Antilles, CNRS-8067, IRD 207, 75231 Paris, France.

BOREA, Normandie University, University of Caen-Normandy, Esplanade de la Paix, CEDEX, 14032 Caen, France.

出版信息

Mar Drugs. 2021 Aug 28;19(9):490. doi: 10.3390/md19090490.

Abstract

Antimicrobial peptides (AMPs) participate in the immune system to avoid infection, are present in all living organisms and can be used as drugs. Fish express numerous AMP families including defensins, cathelicidins, liver-expressed antimicrobial peptides (LEAPs), histone-derived peptides, and piscidins (a fish-specific AMP family). The present study demonstrates for the first time the occurrence of several AMPs in lionfish (). Using the lionfish transcriptome, we identified four transcript sequences encoding cysteine-rich AMPs and two new transcripts encoding piscidin-like peptides. These AMPs are described for the first time in a species of the Scorpaenidae family. A functional approach on new pteroicidins was carried out to determine antimicrobial sequences and potential uses, with a view to using some of these AMPs for human health or in aquaculture.

摘要

抗菌肽 (AMPs) 参与免疫系统以避免感染,存在于所有生物中,并可用作药物。鱼类表达多种 AMP 家族,包括防御素、cathelicidins、肝表达抗菌肽 (LEAPs)、组蛋白衍生肽和鱼精蛋白(一种鱼类特有的 AMP 家族)。本研究首次证明了狮子鱼中存在多种 AMPs。利用狮子鱼转录组,我们鉴定了四个编码富含半胱氨酸的 AMP 的转录序列和两个编码鱼精蛋白样肽的新转录序列。这些 AMP 是首次在 Scorpaenidae 科的一种鱼类中描述的。对新型 pteroicidins 进行了功能研究,以确定抗菌序列和潜在用途,以期将这些 AMP 中的一些用于人类健康或水产养殖。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1199/8468504/6669668768ae/marinedrugs-19-00490-g0A1.jpg

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