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从遗传学、生理学和大脑进化的角度重新审视精神疾病中的串联重复序列。

Revisiting tandem repeats in psychiatric disorders from perspectives of genetics, physiology, and brain evolution.

作者信息

Xiao Xiao, Zhang Chu-Yi, Zhang Zhuohua, Hu Zhonghua, Li Ming, Li Tao

机构信息

Key Laboratory of Animal Models and Human Disease Mechanisms of the Chinese Academy of Sciences and Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan, China.

Kunming College of Life Science, University of Chinese Academy of Sciences, Kunming, Yunnan, China.

出版信息

Mol Psychiatry. 2022 Jan;27(1):466-475. doi: 10.1038/s41380-021-01329-1. Epub 2021 Oct 14.

Abstract

Genome-wide association studies (GWASs) have revealed substantial genetic components comprised of single nucleotide polymorphisms (SNPs) in the heritable risk of psychiatric disorders. However, genetic risk factors not covered by GWAS also play pivotal roles in these illnesses. Tandem repeats, which are likely functional but frequently overlooked by GWAS, may account for an important proportion in the "missing heritability" of psychiatric disorders. Despite difficulties in characterizing and quantifying tandem repeats in the genome, studies have been carried out in an attempt to describe impact of tandem repeats on gene regulation and human phenotypes. In this review, we have introduced recent research progress regarding the genomic distribution and regulatory mechanisms of tandem repeats. We have also summarized the current knowledge of the genetic architecture and biological underpinnings of psychiatric disorders brought by studies of tandem repeats. These findings suggest that tandem repeats, in candidate psychiatric risk genes or in different levels of linkage disequilibrium (LD) with psychiatric GWAS SNPs and haplotypes, may modulate biological phenotypes related to psychiatric disorders (e.g., cognitive function and brain physiology) through regulating alternative splicing, promoter activity, enhancer activity and so on. In addition, many tandem repeats undergo tight natural selection in the human lineage, and likely exert crucial roles in human brain evolution. Taken together, the putative roles of tandem repeats in the pathogenesis of psychiatric disorders is strongly implicated, and using examples from previous literatures, we wish to call for further attention to tandem repeats in the post-GWAS era of psychiatric disorders.

摘要

全基因组关联研究(GWAS)已揭示,在精神疾病的遗传风险中,由单核苷酸多态性(SNP)组成的大量遗传成分。然而,GWAS未涵盖的遗传风险因素在这些疾病中也起着关键作用。串联重复序列可能具有功能,但常被GWAS忽视,它们可能在精神疾病“缺失的遗传力”中占重要比例。尽管在基因组中表征和量化串联重复序列存在困难,但人们已开展研究以描述串联重复序列对基因调控和人类表型的影响。在本综述中,我们介绍了关于串联重复序列的基因组分布和调控机制的最新研究进展。我们还总结了串联重复序列研究带来的关于精神疾病遗传结构和生物学基础的当前知识。这些发现表明,在候选精神疾病风险基因中,或与精神疾病GWAS SNP和单倍型处于不同连锁不平衡(LD)水平的串联重复序列,可能通过调节可变剪接、启动子活性、增强子活性等,调节与精神疾病相关的生物学表型(如认知功能和脑生理学)。此外,许多串联重复序列在人类谱系中经历了严格的自然选择,并可能在人类大脑进化中发挥关键作用。综上所述,串联重复序列在精神疾病发病机制中的假定作用得到了有力暗示,我们希望通过引用以往文献中的例子,呼吁在精神疾病的GWAS后时代进一步关注串联重复序列。

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