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显微外科吻合术工作流程识别挑战赛报告。

MIcro-surgical anastomose workflow recognition challenge report.

机构信息

Univ Rennes,INSERM, LTSI - UMR 1099, Rennes, F35000, France.

Gazi University, Faculty of Engineering; Department of Computer Engineering, Ankara, Turkey.

出版信息

Comput Methods Programs Biomed. 2021 Nov;212:106452. doi: 10.1016/j.cmpb.2021.106452. Epub 2021 Oct 10.

Abstract

BACKGROUND AND OBJECTIVE

Automatic surgical workflow recognition is an essential step in developing context-aware computer-assisted surgical systems. Video recordings of surgeries are becoming widely accessible, as the operational field view is captured during laparoscopic surgeries. Head and ceiling mounted cameras are also increasingly being used to record videos in open surgeries. This makes videos a common choice in surgical workflow recognition. Additional modalities, such as kinematic data captured during robot-assisted surgeries, could also improve workflow recognition. This paper presents the design and results of the MIcro-Surgical Anastomose Workflow recognition on training sessions (MISAW) challenge whose objective was to develop workflow recognition models based on kinematic data and/or videos.

METHODS

The MISAW challenge provided a data set of 27 sequences of micro-surgical anastomosis on artificial blood vessels. This data set was composed of videos, kinematics, and workflow annotations. The latter described the sequences at three different granularity levels: phase, step, and activity. Four tasks were proposed to the participants: three of them were related to the recognition of surgical workflow at three different granularity levels, while the last one addressed the recognition of all granularity levels in the same model. We used the average application-dependent balanced accuracy (AD-Accuracy) as the evaluation metric. This takes unbalanced classes into account and it is more clinically relevant than a frame-by-frame score.

RESULTS

Six teams participated in at least one task. All models employed deep learning models, such as convolutional neural networks (CNN), recurrent neural networks (RNN), or a combination of both. The best models achieved accuracy above 95%, 80%, 60%, and 75% respectively for recognition of phases, steps, activities, and multi-granularity. The RNN-based models outperformed the CNN-based ones as well as the dedicated modality models compared to the multi-granularity except for activity recognition.

CONCLUSION

For high levels of granularity, the best models had a recognition rate that may be sufficient for applications such as prediction of remaining surgical time. However, for activities, the recognition rate was still low for applications that can be employed clinically. The MISAW data set is publicly available at http://www.synapse.org/MISAW to encourage further research in surgical workflow recognition.

摘要

背景与目的

自动手术流程识别是开发上下文感知计算机辅助手术系统的重要步骤。随着腹腔镜手术中捕获手术操作视野,手术视频记录变得越来越普及。头和天花板安装的摄像机也越来越多地用于记录开放手术中的视频。这使得视频成为手术流程识别的常用选择。例如,在机器人辅助手术中捕获的运动学数据等其他模态也可以改善手术流程识别。本文介绍了基于运动学数据和/或视频开发手术流程识别模型的 MIcro-Surgical Anastomose Workflow recognition on training sessions (MISAW) 挑战赛的设计和结果。

方法

MISAW 挑战赛提供了一组 27 个人工血管显微吻合术序列的数据集。该数据集由视频、运动学和工作流程注释组成。后者以三个不同的粒度级别描述了序列:阶段、步骤和活动。向参与者提出了四项任务:其中三项与在三个不同的粒度级别识别手术流程有关,而最后一项则涉及在同一模型中识别所有的粒度级别。我们使用平均应用相关平衡准确性(AD-Accuracy)作为评估指标。该指标考虑了不平衡的类别,比逐帧得分更具有临床意义。

结果

有六支队伍至少参加了一项任务。所有模型都使用了深度学习模型,如卷积神经网络(CNN)、循环神经网络(RNN)或两者的组合。最佳模型在识别阶段、步骤、活动和多粒度方面的准确率分别超过 95%、80%、60%和 75%。与多粒度相比,RNN 模型优于 CNN 模型和专用模态模型,除了活动识别之外。

结论

对于较高的粒度级别,最佳模型的识别率可能足以满足例如剩余手术时间预测等应用。然而,对于活动识别,其识别率对于可应用于临床的应用仍然较低。MISAW 数据集可在 http://www.synapse.org/MISAW 上公开获取,以鼓励对手术流程识别的进一步研究。

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