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ARHGAP11A是一种预后生物标志物,与胃癌中的免疫浸润相关。

ARHGAP11A Is a Prognostic Biomarker and Correlated With Immune Infiltrates in Gastric Cancer.

作者信息

Fan Biao, Ji Ke, Bu Zhaode, Zhang Ji, Yang Heli, Li Jialin, Wu Xiaojiang

机构信息

Key Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Gastrointestinal Cancer Center, Peking University Cancer Hospital and Institute, Beijing, China.

出版信息

Front Mol Biosci. 2021 Oct 18;8:720645. doi: 10.3389/fmolb.2021.720645. eCollection 2021.

Abstract

ARHGAP11A, belongs to RhoGAPs family, is vital for cell motility. However, the role of ARHGAP11A in gastric cancer is obscure. The expression level of ARHGAP11A was analyzed by Oncomine database. The correlation of ARHGAP11A expression with immune infiltrates and associated gene markers was clarified by Tumor IMmune Estimation Resource and Gene Expression Profiling Interactive Analysis database. The correlation between ARHGAP11A expression and the patient prognosis was identified by Kaplan-Meier plotter and PrognoScan. Genetic changes of ARHGAP11A were analyzed by cBioPortal. The protein-protein interaction network and gene functional enrichment analysis were constructed and performed by GeneMANIA and Metascape. We found that the expression levels of ARHGAP11A were elevated in various cancers including gastric cancer when compared with normal tissues. High expression of ARHGAP11A was significantly correlated with a better prognosis in gastric cancer. We revealed that the expression of ARHGAP11A was negatively associated with infiltration levels of CD8 T cells, CD4 T cells, macrophages and dendritic cells. In addition, ARHGAP11A expression was significantly correlated with gene markers of these immune cells. Lastly, gene functional enrichment analysis indicated that ARHGAP11A involved in regulating lymphocyte activation, cell division, cell killing, myeloid leukocyte differentiation and leukocyte apoptosis. Our findings demonstrated that ARHGAP11A was a valuable prognostic biomarker in gastric cancer. Further work is needed to validate its role and underlying mechanisms in regulating immune infiltrates.

摘要

ARHGAP11A属于RhoGAPs家族,对细胞运动至关重要。然而,ARHGAP11A在胃癌中的作用尚不清楚。通过Oncomine数据库分析ARHGAP11A的表达水平。通过肿瘤免疫估计资源和基因表达谱交互分析数据库阐明ARHGAP11A表达与免疫浸润及相关基因标志物的相关性。通过Kaplan-Meier绘图仪和PrognoScan确定ARHGAP11A表达与患者预后之间的相关性。通过cBioPortal分析ARHGAP11A的基因变化。通过GeneMANIA和Metascape构建并进行蛋白质-蛋白质相互作用网络和基因功能富集分析。我们发现,与正常组织相比,ARHGAP11A在包括胃癌在内的各种癌症中的表达水平均升高。ARHGAP11A的高表达与胃癌患者的较好预后显著相关。我们发现ARHGAP11A的表达与CD8 T细胞、CD4 T细胞、巨噬细胞和树突状细胞的浸润水平呈负相关。此外,ARHGAP11A表达与这些免疫细胞的基因标志物显著相关。最后,基因功能富集分析表明ARHGAP11A参与调节淋巴细胞活化、细胞分裂、细胞杀伤、髓系白细胞分化和白细胞凋亡。我们的研究结果表明,ARHGAP11A是胃癌中有价值的预后生物标志物。需要进一步的工作来验证其在调节免疫浸润中的作用和潜在机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9764/8558302/746dc8364eee/fmolb-08-720645-g001.jpg

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