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具有交替阳离子和疏水残基的两亲性β-链状[XZ]肽的抗生素潜力及生物物理特性

Antibiotic Potential and Biophysical Characterization of Amphipathic β-Stranded [XZ] Peptides With Alternating Cationic and Hydrophobic Residues.

作者信息

Strandberg Erik, Wadhwani Parvesh, Ulrich Anne S

机构信息

Karlsruhe Institute of Technology, Institute of Biological Interfaces (IBG-2), Karlsruhe, Germany.

Karlsruhe Institute of Technology, Institute of Organic Chemistry, Karlsruhe, Germany.

出版信息

Front Med Technol. 2021 Feb 4;3:622096. doi: 10.3389/fmedt.2021.622096. eCollection 2021.

Abstract

Cationic membrane-active peptides are considered to be promising candidates for antibiotic treatment. Many natural and artificial sequences show an antimicrobial activity when they are able to take on an amphipathic fold upon membrane binding, which in turn perturbs the integrity of the lipid bilayer. Most known structures are α-helices and β-hairpins, but also cyclic knots and other irregular conformations are known. Linear β-stranded antimicrobial peptides are not so common in nature, but numerous model sequences have been designed. Interestingly, many of them tend to be highly membranolytic, but also have a significant tendency to self-assemble into β-sheets by hydrogen-bonding. In this minireview we examine the literature on such amphipathic peptides consisting of simple repetitive sequences of alternating cationic and hydrophobic residues, and discuss their advantages and disadvantages. Their interactions with lipids have been characterized with a number of biophysical techniques-especially circular dichroism, fluorescence, and infrared-in order to determine their secondary structure, membrane binding, aggregation tendency, and ability to permeabilize vesicles. Their activities against bacteria, biofilms, erythrocytes, and human cells have also been studied using biological assays. In line with the main scope of this Special Issue, we attempt to correlate the biophysical results with the biological data, and in particular we discuss which properties (length, charge, aggregation tendency, etc.) of these simple model peptides are most relevant for their biological function. The overview presented here offers ideas for future experiments, and also suggests a few design rules for promising β-stranded peptides to develop efficient antimicrobial agents.

摘要

阳离子膜活性肽被认为是抗生素治疗的有前途的候选者。许多天然和人工序列在与膜结合时能够呈现两亲性折叠,进而扰乱脂质双层的完整性,此时它们便表现出抗菌活性。大多数已知结构为α-螺旋和β-发夹结构,但也存在环状结和其他不规则构象。线性β-链抗菌肽在自然界中并不常见,但已设计出许多模型序列。有趣的是,其中许多肽不仅倾向于具有高度的膜溶解作用,而且还具有通过氢键自组装成β-折叠片的显著倾向。在这篇小型综述中,我们研究了关于此类由阳离子和疏水残基交替的简单重复序列组成的两亲性肽的文献,并讨论了它们的优缺点。已经使用多种生物物理技术——尤其是圆二色性、荧光和红外技术——来表征它们与脂质的相互作用,以确定它们的二级结构、膜结合、聚集倾向以及使囊泡通透的能力。还使用生物学测定法研究了它们对细菌、生物膜、红细胞和人类细胞的活性。根据本期特刊的主要范围,我们试图将生物物理结果与生物学数据相关联,特别是我们讨论了这些简单模型肽的哪些特性(长度、电荷、聚集倾向等)与其生物学功能最相关。此处呈现的综述为未来的实验提供了思路,也为开发高效抗菌剂的有前景的β-链肽提出了一些设计规则。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d71e/8757834/ba014f43e071/fmedt-03-622096-g0001.jpg

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