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长链非编码RNA TMCO1-AS1的高表达与肝细胞癌的不良预后相关。

High Expression of Long Non-Coding RNA TMCO1-AS1 is Associated With Poor Prognosis of Hepatocellular Carcinoma.

作者信息

Huang Xuelian, Zhu Sicong, Zhang Kelin, Tan Wenliang, Chen Yajin, Shang Changzhen

机构信息

Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China.

Department of Anesthesiology, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China.

出版信息

Front Mol Biosci. 2022 Jan 24;9:814058. doi: 10.3389/fmolb.2022.814058. eCollection 2022.

Abstract

The molecular pathways along with the clinical significance of long non-coding RNAs (lncRNAs) in hepatocellular carcinoma (HCC) remain uncertain. Our study sought to identify and characterize lncRNAs associated with HCC. LncRNA TMCO1-AS1 was identified by differential expression analysis, receiver operating characteristic (ROC) analysis, and univariate analysis using RNA sequencing and clinical information of HCC from the public database. Then clinical correlations and survival analysis were conducted to further appraise the prognostic significance of lncRNA TMCO1-AS1 in HCC. Hepatoma and adjoining normal tissues from 66 patients who received surgical operation at our center were used to verify the results of the bioinformatics analysis. A survival prognostic model was established combining TMCO1-AS1 expression and other clinical characteristics. Bioinformatics analysis showed the aberrant high expression of TMCO1-AS1 in HCC tissue. TMCO1-AS1 expression was positively correlated with alpha-fetoprotein (AFP) level, vascular invasion, tumor stage, as well as tumor differentiation. Moreover, survival analysis found a significant inverse association between the expression of TMCO1-AS1 and the survival of patients with HCC. Cox analysis indicated that TMCO1-AS1 was an independent factor for HCC prognosis. Analysis of the HCC tissues from patients at our center provided results similar to those of the bioinformatics analysis. Risk models for overall survival (OS) and recurrence-free survival (RFS) incorporating TMCO1-AS1 exhibited better sensitivity and specificity than using clinical characteristics alone. High TMCO1-AS1 expression is significantly correlated with the unfavorable poor prognosis of HCC, indicating its potential of being a novel prognostic marker for HCC.

摘要

长链非编码RNA(lncRNA)在肝细胞癌(HCC)中的分子途径及其临床意义仍不明确。我们的研究旨在鉴定并表征与HCC相关的lncRNA。通过差异表达分析、受试者工作特征(ROC)分析以及使用来自公共数据库的HCC RNA测序和临床信息进行单变量分析,鉴定出了lncRNA TMCO1-AS1。然后进行临床相关性和生存分析,以进一步评估lncRNA TMCO1-AS1在HCC中的预后意义。使用来自我们中心接受手术的66例患者的肝癌及相邻正常组织来验证生物信息学分析结果。结合TMCO1-AS1表达和其他临床特征建立了生存预后模型。生物信息学分析显示TMCO1-AS1在HCC组织中异常高表达。TMCO1-AS1表达与甲胎蛋白(AFP)水平、血管侵犯、肿瘤分期以及肿瘤分化呈正相关。此外,生存分析发现TMCO1-AS1表达与HCC患者的生存之间存在显著的负相关。Cox分析表明TMCO1-AS1是HCC预后的独立因素。对我们中心患者的HCC组织分析提供了与生物信息学分析相似的结果。纳入TMCO1-AS1的总生存(OS)和无复发生存(RFS)风险模型比单独使用临床特征表现出更好的敏感性和特异性。高TMCO1-AS1表达与HCC的不良预后显著相关,表明其作为HCC新型预后标志物的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f9b/8819098/268a4fa44586/fmolb-09-814058-g001.jpg

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