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sRNA 分析表明,不同植物病毒参与了 RNA 沉默相关基因的激活和对‘GF305’桃接穗‘Garrigues’巴旦木的防御反应。

sRNA Analysis Evidenced the Involvement of Different Plant Viruses in the Activation of RNA Silencing-Related Genes and the Defensive Response Against of 'GF305' Peach Grafted with 'Garrigues' Almond.

机构信息

Department of Plant Molecular Genetics, CNB-CSIC, 28049 Madrid, Spain.

Department of Plant Breeding, CEBAS-CSIC, 30100 Murcia, Spain.

出版信息

Phytopathology. 2022 Sep;112(9):2012-2021. doi: 10.1094/PHYTO-01-22-0032-R. Epub 2022 Aug 1.

Abstract

(PPV) causes sharka disease in trees. Peach () trees are severely affected by PPV, and no definitive source of genetic resistance has been identified. However, previous results showed that PPV-resistant 'Garrigues' almond () was able to transfer its resistance to 'GF305' peach through grafting, reducing symptoms and viral load in PPV-infected plants. A recent study tried to identify genes responsible for this effect by studying messenger RNA expression through RNA sequencing in peach and almond plants, before and after grafting and before and after PPV infection. In this work, we used the same peach and almond samples but focused the high-throughput analyses on small RNA (sRNA) expression. We studied massive sequencing data and found an interesting pattern of sRNA overexpression linked to antiviral defense genes that suggested activation of these genes followed by downregulation to basal levels. We also discovered that 'Garrigues' almond plants were infected by different plant viruses that were transferred to peach plants. The large amounts of viral sRNA found in grafted peaches indicated a strong RNA silencing antiviral response and led us to postulate that these plant viruses could be collaborating in the observed "Garrigues effect."

摘要

(PPV) 在树木中引起疱疹病。桃树受 PPV 的严重影响,尚未确定其遗传抗性的明确来源。然而,先前的结果表明,能够将其抗性转移到通过嫁接的‘GF305’桃树上的抗 PPV‘Garrigues’巴旦木,可减轻感染植株的症状和病毒载量。最近的一项研究试图通过在桃和巴旦木植物嫁接前后以及感染 PPV 前后进行 RNA 测序来研究信使 RNA 表达,从而鉴定出负责这种效果的基因。在这项工作中,我们使用了相同的桃和巴旦木样本,但将高通量分析集中在小 RNA(sRNA)表达上。我们研究了大量测序数据,发现与抗病毒防御基因相关的 sRNA 过表达的有趣模式,这表明这些基因的激活随后下调至基础水平。我们还发现,‘Garrigues’巴旦木植物感染了不同的植物病毒,这些病毒被转移到了桃树上。在嫁接的桃树上发现了大量的病毒 sRNA,表明强烈的 RNA 沉默抗病毒反应,这使我们假设这些植物病毒可能在观察到的“Garrigues 效应”中协同作用。

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