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微小RNA生物发生基因中的多态性rs3742330与沙特人群中的假性剥脱性青光眼相关。

Polymorphism rs3742330 in microRNA Biogenesis Gene Is Associated with Pseudoexfoliation Glaucoma in Saudi Cohort.

作者信息

Kondkar Altaf A, Azad Taif A, Sultan Tahira, Radhakrishnan Rakesh, Osman Essam A, Almobarak Faisal A, Lobo Glenn P, Al-Obeidan Saleh A

机构信息

Department of Ophthalmology, College of Medicine, King Saud University, Riyadh 12372, Saudi Arabia.

Glaucoma Research Chair in Department of Ophthalmology, College of Medicine, King Saud University, Riyadh 12372, Saudi Arabia.

出版信息

Genes (Basel). 2022 Mar 10;13(3):489. doi: 10.3390/genes13030489.

Abstract

We investigated the association between (rs3742330) and (rs10719) polymorphisms and pseudoexfoliation glaucoma (PXG) and related clinical phenotypes in a Saudi cohort. In a retrospective case-control study, TaqMan real-time, PCR-based genotyping was performed in 340 participants with 246 controls and 94 PXG cases. The minor (G) allele frequency of rs3742330 in PXG (0.03) was significantly different from that in the controls (0.08) and protective against PXG (odds ratio (OR) = 0.38, 95% confidence interval (CI) = 0.16-0.92), = 0.017). Similarly, the rs3742330 genotypes showed a significant protective association with PXG in dominant ( = 0.019, OR = 0.38, 95% CI = 0.15-0.92), over-dominant ( = 0.024, OR = 0.39, 95% CI = 0.16-0.95), and log-additive models ( = 0.017, OR = 0.38, 95% CI = 0.16-0.92). However, none remained significant after an adjustment for age, sex, and multiple testing. Rs10719 in DROSHA did not show any significant allelic or genotype association with PXG. However, a protective effect of the GA haplotype in and and PXG ( = 0.034) was observed. Both polymorphisms showed no significant effect on intraocular pressure and the cup-disk ratio. In conclusion, we report a significant genetic association between variant rs3742330 in , a gene involved in miRNA biogenesis, and PXG. Further investigation in a larger group of patients of different ethnicities and functional studies are warranted to replicate and validate its potential role in PXG.

摘要

我们在一个沙特队列中研究了(rs3742330)和(rs10719)多态性与假性剥脱性青光眼(PXG)及相关临床表型之间的关联。在一项回顾性病例对照研究中,对340名参与者进行了基于TaqMan实时荧光定量PCR的基因分型,其中包括246名对照和94例PXG病例。PXG中rs3742330的次要(G)等位基因频率(0.03)与对照组(0.08)有显著差异,对PXG有保护作用(优势比(OR)=0.38,95%置信区间(CI)=0.16 - 0.92),P = 0.017)。同样,rs3742330基因型在显性模型(P = 0.019,OR = 0.38,95% CI = 0.15 - 0.92)、超显性模型(P = 0.024,OR = 0.39,95% CI = 0.16 - 0.95)和对数加性模型(P = 0.017,OR = 0.38,95% CI = 0.16 - 0.92)中均显示出与PXG有显著的保护关联。然而,在对年龄、性别和多重检验进行校正后,均不再具有显著性。DROSHA中的rs10719未显示出与PXG有任何显著的等位基因或基因型关联。然而,观察到GA单倍型在和以及PXG中具有保护作用(P = 0.034)。这两种多态性对眼压和杯盘比均无显著影响。总之,我们报告了参与微小RNA生物发生的基因中rs3742330变异与PXG之间存在显著的遗传关联。有必要在更大规模的不同种族患者群体中进行进一步研究和功能研究,以重复和验证其在PXG中的潜在作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0b1/8956095/242eb355f2de/genes-13-00489-g001.jpg

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