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铁死亡相关基因对多形性胶质母细胞瘤的免疫、干性有影响并可预测其预后

Ferroptosis-Related Gene Contributes to Immunity, Stemness and Predicts Prognosis in Glioblastoma Multiforme.

作者信息

Dong Jiawei, Zhao Hongtao, Wang Fang, Jin Jiaqi, Ji Hang, Yan Xiuwei, Wang Nan, Zhang Jiheng, Hu Shaoshan

机构信息

Department of Neurosurgery, The Second Affiliated Hospital of Harbin Medical University, Harbin, China.

Cancer Center, Department of Neurosurgery, Zhejiang Provincial People's Hospital, Affiliated People's Hospital, Hangzhou Medical College, Hangzhou, China.

出版信息

Front Neurol. 2022 Mar 10;13:829926. doi: 10.3389/fneur.2022.829926. eCollection 2022.

Abstract

Ferroptosis, a recently discovered regulated programmed cell death, is associated with tumorigenesis and progression in glioblastoma. Based on widely recognized ferroptosis-related genes (FRGs), the regulation of ferroptosis patterns and corresponding characteristics of immune infiltration of 516 GBM samples with GSE13041, TCGA-GBM, and CGGA-325 were comprehensively analyzed. Here, we revealed the expression, mutations, and CNV of FRGs in GBM. We identified three distinct regulation patterns of ferroptosis and found the hub genes of immunity and stemness among DEGs in three patterns. A prognostic model was constructed based on five FRGs and verified at the mRNA and protein level. The risk score can not only predict the prognosis but also the degree of immune infiltration and ICB responsiveness by functional annotation. The overall assessment of FRGs in GBM patients will guide the direction of improved research and develop new prognostic prediction tools.

摘要

铁死亡是一种最近发现的受调控的程序性细胞死亡,与胶质母细胞瘤的肿瘤发生和进展相关。基于广泛认可的铁死亡相关基因(FRGs),对来自GSE13041、TCGA-GBM和CGGA-325的516个胶质母细胞瘤样本的铁死亡模式调控以及免疫浸润的相应特征进行了综合分析。在此,我们揭示了FRGs在胶质母细胞瘤中的表达、突变和拷贝数变异。我们确定了三种不同的铁死亡调控模式,并在三种模式的差异表达基因中发现了免疫和干性的枢纽基因。基于五个FRGs构建了一个预后模型,并在mRNA和蛋白质水平进行了验证。风险评分不仅可以预测预后,还可以通过功能注释预测免疫浸润程度和免疫检查点阻断(ICB)反应性。对胶质母细胞瘤患者FRGs的全面评估将为改进研究方向提供指导,并开发新的预后预测工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd2a/8960280/399922f5f99f/fneur-13-829926-g0001.jpg

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