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从埃及一家三级护理医院的污水中分离并鉴定针对耐甲氧西林临床分离株的裂解性噬菌体。

Isolation and characterization of lytic bacteriophages from sewage at an egyptian tertiary care hospital against methicillin-resistant clinical isolates.

作者信息

Samir Safia, El-Far Amira, Okasha Hend, Mahdy Rania, Samir Fatima, Nasr Sami

机构信息

Biochemistry and Molecular Biology Department, Theodor Bilharz Research Institute (TBRI), Giza, Egypt.

Microbiology Department, Theodor Bilharz Research Institute (TBRI), Giza, Egypt.

出版信息

Saudi J Biol Sci. 2022 May;29(5):3097-3106. doi: 10.1016/j.sjbs.2022.03.019. Epub 2022 Mar 19.

Abstract

BACKGROUND

Methicillin resistant (MRSA) is a pathogen to humans causing life-threatening infections. MRSA have the capability to grow resistance to many antibiotics, and phage therapy is one treatment option for this infection.

OBJECTIVES

The aim of the present study was to isolate and characterize the lytic bacteriophages specific to MRSA from domestic sewage water at a tertiary care hospital in Egypt.

METHODS

Thirty MRSA strains were isolated from different clinical samples admitted to the microbiology lab at Theodor Bilharz Research institute (TBRI) hospital, Giza, Egypt. They were confirmed to be MRSA through phenotypic detection and conventional PCR for gene. They were used for the isolation of phages from sewage water of TBRI hospital. Plaque assay was applied to purify and quantify the titer of the isolated phages. The host range of the isolated phages was detected using the spot test assay. The morphology of phages was confirmed using transmission electron microscope (TEM). Digestion of DNA extracted from phages with endonuclease enzymes including and was performed. SDS-PAGE was performed to analyze MRSA specific phage proteins. As a positive control prophages were isolated from a mitomycin C (MitC) treated culture of . strain ATCC25923. Further characterization using conventional polymerase chain reaction (PCR) was used to select three known Staphylophages by detecting the endolysin gene of phage K, the polymerase gene of phage 44AHJD, and the minor tail gene of phage P68.

RESULTS

Isolated phages in this research displayed a wide host range against MRSA using the spot test, out of thirty tested MRSA isolates 24 were sensitive and got lysed (80%). The titer of the phages was estimated to be 1.04 × 10 pfu/ml using plaque test. Identification of head and tail morphology of the phages was achieved using TEM and they were designated to tailed phages of order , they composed an icosahedral capsid. Prophages were isolated through MitC induction. DNA of phages was digested by endonuclease enzymes. Conventional PCR yielded 341 bp of phage K endolysin gene and phage P68 minor tail protein gene 501 bp. Protein analysis using SDS-PAGE showed 4 proteins of sizes between 42 kDa and 140 kDa.

CONCLUSION

Phages isolated here are alike to others mentioned in previous studies. The high broad host range of the isolated phages is promising to control MRSA and can be in the future commercially suitable for treatment as lysate preparations. Animal models of phage-bacterial interaction will be our next step that may help in resolving the multidrug resistant crisis of MRSA in Egypt.

摘要

背景

耐甲氧西林金黄色葡萄球菌(MRSA)是一种可导致人类危及生命感染的病原体。MRSA有能力对多种抗生素产生耐药性,而噬菌体疗法是治疗这种感染的一种选择。

目的

本研究的目的是从埃及一家三级护理医院的生活污水中分离并鉴定对MRSA具有特异性的裂解性噬菌体。

方法

从埃及吉萨市西奥多·比尔哈兹研究所(TBRI)医院微生物实验室接收的不同临床样本中分离出30株MRSA菌株。通过表型检测和针对 基因的常规PCR确认它们为MRSA。它们被用于从TBRI医院的污水中分离噬菌体。采用噬菌斑测定法纯化并定量分离出的噬菌体的滴度。使用点滴试验检测分离出的噬菌体的宿主范围。使用透射电子显微镜(TEM)确认噬菌体的形态。用包括 和 在内的内切酶消化从噬菌体中提取的DNA。进行SDS-PAGE分析MRSA特异性噬菌体蛋白。作为阳性对照,从经丝裂霉素C(MitC)处理的 菌株ATCC25923培养物中分离出前噬菌体。通过检测噬菌体K的内溶素基因、噬菌体44AHJD的聚合酶基因和噬菌体P68的小尾基因,使用常规聚合酶链反应(PCR)进行进一步鉴定,以选择三种已知的葡萄球菌噬菌体。

结果

本研究中分离出的噬菌体在点滴试验中对MRSA显示出广泛的宿主范围,在30株受试MRSA分离株中,24株敏感并被裂解(80%)。使用噬菌斑试验估计噬菌体的滴度为1.04×10 pfu/ml。使用TEM实现了对噬菌体头部和尾部形态的鉴定,它们被指定为 目有尾噬菌体,它们构成二十面体衣壳。通过MitC诱导分离出前噬菌体。噬菌体的DNA被内切酶消化。常规PCR产生了341 bp的噬菌体K内溶素基因和501 bp的噬菌体P68小尾蛋白基因。使用SDS-PAGE进行的蛋白质分析显示有4种大小在42 kDa至140 kDa之间的蛋白质。

结论

这里分离出的噬菌体与先前研究中提到的其他噬菌体相似。分离出的噬菌体的高广泛宿主范围有望控制MRSA,并且在未来作为裂解物制剂在商业上适合用于治疗。噬菌体 - 细菌相互作用的动物模型将是我们的下一步,这可能有助于解决埃及MRSA的多重耐药危机。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ec0/8961222/3f60dffc564e/gr1.jpg

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