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有氧和无氧条件下的差异基因表达

Differential Gene Expression of under Aerobic and Anaerobic Conditions.

作者信息

Homa Mónika, Ibragimova Sandugash, Szebenyi Csilla, Nagy Gábor, Zsindely Nóra, Bodai László, Vágvölgyi Csaba, Nagy Gábor, Papp Tamás

机构信息

Department of Microbiology, Faculty of Science and Informatics, University of Szeged, H-6726 Szeged, Hungary.

Department of Biochemistry and Molecular Biology, Faculty of Science and Informatics, University of Szeged, H-6726 Szeged, Hungary.

出版信息

J Fungi (Basel). 2022 Apr 15;8(4):404. doi: 10.3390/jof8040404.

Abstract

Mucor lusitanicus and some other members of the fungal order Mucorales display the phenomenon of morphological dimorphism. This means that these fungi aerobically produce filamentous hyphae, developing a coenocytic mycelium, but they grow in a multipolar yeast-like form under anaerobiosis. Revealing the molecular mechanism of the reversible yeast-hyphal transition can be interesting for both the biotechnological application and in the understanding of the pathomechanism of mucormycosis. In the present study, transcriptomic analyses were carried out after cultivating the fungus either aerobically or anaerobically revealing significant changes in gene expression under the two conditions. In total, 539 differentially expressed genes (FDR < 0.05, |log2FC| ≥ 3) were identified, including 190 upregulated and 349 downregulated transcripts. Within the metabolism-related genes, carbohydrate metabolism was proven to be especially affected. Anaerobiosis also affected the transcription of transporters: among the 14 up- and 42 downregulated transporters, several putative sugar transporters were detected. Moreover, a considerable number of transcripts related to amino acid transport and metabolism, lipid transport and metabolism, and energy production and conversion were proven to be downregulated when the culture had been transferred into an anaerobic atmosphere.

摘要

葡萄牙毛霉和毛霉目真菌的其他一些成员表现出形态二态性现象。这意味着这些真菌在有氧条件下产生丝状菌丝,形成多核菌丝体,但在厌氧条件下以多极酵母样形式生长。揭示酵母 - 菌丝可逆转变的分子机制对于生物技术应用和了解毛霉病的发病机制都可能很有趣。在本研究中,在有氧或厌氧培养真菌后进行了转录组分析,揭示了两种条件下基因表达的显著变化。总共鉴定出539个差异表达基因(FDR < 0.05,|log2FC|≥3),包括190个上调转录本和349个下调转录本。在与代谢相关的基因中,碳水化合物代谢被证明受到特别影响。厌氧也影响转运蛋白的转录:在14个上调和42个下调的转运蛋白中,检测到几个假定的糖转运蛋白。此外,当培养物转移到厌氧环境中时,大量与氨基酸转运和代谢、脂质转运和代谢以及能量产生和转换相关的转录本被证明下调。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eb4e/9031258/f70fa72f3eb4/jof-08-00404-g001.jpg

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