• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

共价标记-质谱法为非共价聚合物-蛋白质复合物提供了分子水平的理解。

Covalent Labeling-Mass Spectrometry Provides a Molecular Understanding of Noncovalent Polymer-Protein Complexation.

机构信息

Department of Polymer Science and Engineering, University of Massachusetts Amherst, Amherst, Massachusetts 01003, United States.

Department of Chemistry, University of Massachusetts Amherst, Amherst, Massachusetts 01003, United States.

出版信息

ACS Biomater Sci Eng. 2022 Jun 13;8(6):2489-2499. doi: 10.1021/acsbiomaterials.2c00125. Epub 2022 May 24.

DOI:10.1021/acsbiomaterials.2c00125
PMID:35608244
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9205173/
Abstract

The delivery of functional proteins to the intracellular space offers tremendous advantages for the development of new therapeutics but is limited by the passage of these large polar biomacromolecules through the cell membrane. Noncovalent polymer-protein binding that is driven by strong carrier-cargo interactions, including electrostatics and hydrophobicity, has previously been explored in the context of delivery of functional proteins. Appropriately designed polymer-based carriers can take advantage of the heterogeneous surface of protein cargoes, where multiple types of physical binding interactions with polymers can occur. Traditional methods of assessing polymer-protein binding, including dynamic light scattering, circular dichroism spectroscopy, and fluorescence-based assays, are useful in the study of new polymer-based carriers but face a number of limitations. We implement for the first time the method of covalent labeling-mass spectrometry (CL-MS) to probe intermolecular surface interactions within noncovalent polymer-protein complexes. We demonstrate the utility of CL-MS for establishing binding of an amphiphilic block copolymer to negatively charged and hydrophobic surface patches of a model protein, superfolder green fluorescent protein (sfGFP), using diethylpyrocarbonate as a pseudo-specific labeling reagent. In addition, we utilize this method to explore differences at the intermolecular surface as the ratio of polymer to protein increases, particularly in the context of defining effective protein delivery regimes. By promoting an understanding of the intermolecular interactions in polymer-protein binding and identifying sites where polymers bind to protein surfaces, noncovalent polymer carriers can be more effectively designed for protein delivery applications.

摘要

将功能性蛋白质递送到细胞内空间为开发新的治疗方法提供了巨大的优势,但受到这些大型极性生物大分子穿过细胞膜的限制。以前在功能性蛋白质递送上探索了基于非共价聚合物-蛋白质结合的方法,这种结合是由包括静电相互作用和疏水性在内的强载体-货物相互作用驱动的。适当设计的基于聚合物的载体可以利用蛋白质货物的异质表面,其中可以发生多种类型的与聚合物的物理结合相互作用。包括动态光散射、圆二色性光谱和基于荧光的测定在内的传统聚合物-蛋白质结合评估方法在新的基于聚合物的载体研究中很有用,但面临着许多限制。我们首次实施了共价标记-质谱(CL-MS)方法来探测非共价聚合物-蛋白质复合物中的分子间表面相互作用。我们使用二乙基焦碳酸酯作为伪特异性标记试剂,证明了 CL-MS 用于建立两亲嵌段共聚物与模型蛋白质超折叠绿色荧光蛋白(sfGFP)的带负电荷和疏水面斑之间的结合的有用性。此外,我们利用这种方法来探索随着聚合物与蛋白质的比例增加,分子间表面的差异,特别是在定义有效蛋白质递药方案的背景下。通过促进对聚合物-蛋白质结合中分子间相互作用的理解并确定聚合物与蛋白质表面结合的部位,可以更有效地设计非共价聚合物载体用于蛋白质递药应用。

相似文献

1
Covalent Labeling-Mass Spectrometry Provides a Molecular Understanding of Noncovalent Polymer-Protein Complexation.共价标记-质谱法为非共价聚合物-蛋白质复合物提供了分子水平的理解。
ACS Biomater Sci Eng. 2022 Jun 13;8(6):2489-2499. doi: 10.1021/acsbiomaterials.2c00125. Epub 2022 May 24.
2
Protein Binding and Release by Polymeric Cell-Penetrating Peptide Mimics.聚合物型细胞穿透肽模拟物的蛋白结合与释放。
Biomacromolecules. 2022 Jan 10;23(1):57-66. doi: 10.1021/acs.biomac.1c00929. Epub 2021 Dec 8.
3
Noncovalent modification of chymotrypsin surface using an amphiphilic polymer scaffold: implications in modulating protein function.使用两亲性聚合物支架对胰凝乳蛋白酶表面进行非共价修饰:对调节蛋白质功能的影响。
J Am Chem Soc. 2005 Aug 3;127(30):10693-8. doi: 10.1021/ja051947+.
4
The Role of Cargo Binding Strength in Polymer-Mediated Intracellular Protein Delivery.货物结合强度在聚合物介导的细胞内蛋白质递送上的作用。
Bioconjug Chem. 2018 Aug 15;29(8):2679-2690. doi: 10.1021/acs.bioconjchem.8b00363. Epub 2018 Aug 6.
5
Non-Covalent Carrier Hydrophobicity as a Universal Predictor of Intracellular Protein Activity.非共价载体疏水性作为细胞内蛋白活性的通用预测因子。
Biomacromolecules. 2021 Jul 12;22(7):2850-2863. doi: 10.1021/acs.biomac.1c00242. Epub 2021 Jun 22.
6
Covalent labeling-mass spectrometry with non-specific reagents for studying protein structure and interactions.利用非特异性试剂进行共价标记-质谱法研究蛋白质结构和相互作用。
Methods. 2018 Jul 15;144:79-93. doi: 10.1016/j.ymeth.2018.04.002. Epub 2018 Apr 7.
7
Associative and Dissociative Processes in Non-Covalent Polymer-Mediated Intracellular Protein Delivery.非共价聚合物介导的细胞内蛋白质递送中的缔合和离解过程。
Chem Asian J. 2018 Nov 16;13(22):3351-3365. doi: 10.1002/asia.201800849. Epub 2018 Aug 27.
8
Study of the noncovalent interactions between phenolic acid and lysozyme by cold spray ionization mass spectrometry (CSI-MS), multi-spectroscopic and molecular docking approaches.采用冷喷雾电离质谱(CSI-MS)、多光谱和分子对接方法研究酚酸与溶菌酶之间的非共价相互作用。
Talanta. 2020 May 1;211:120762. doi: 10.1016/j.talanta.2020.120762. Epub 2020 Jan 18.
9
Amphiphilic peptide-polymer conjugates based on the coiled-coil helix bundle.基于螺旋束的两亲性肽-聚合物缀合物。
Biomacromolecules. 2010 Jun 14;11(6):1443-52. doi: 10.1021/bm100009e.
10
Effects of the incorporation of a hydrophobic middle block into a PEG-polycation diblock copolymer on the physicochemical and cell interaction properties of the polymer-DNA complexes.将疏水性中间嵌段引入聚乙二醇-聚阳离子二嵌段共聚物对聚合物-脱氧核糖核酸复合物的物理化学性质和细胞相互作用特性的影响。
Biomacromolecules. 2008 Nov;9(11):3294-307. doi: 10.1021/bm800876v. Epub 2008 Oct 23.

引用本文的文献

1
Proteins Can Withstand More Extensive Labeling while Providing Accurate Structural Information in Covalent Labeling-Mass Spectrometry.蛋白质在共价标记-质谱法中可以承受更广泛的标记,同时提供准确的结构信息。
J Am Soc Mass Spectrom. 2024 May 1;35(5):1030-1039. doi: 10.1021/jasms.4c00043. Epub 2024 Apr 6.

本文引用的文献

1
Protein and Antibody Delivery into Difficult-to-Transfect Cells by Polymeric Peptide Mimics.通过聚合物肽模拟物将蛋白质和抗体递送至难转染细胞
ACS Appl Bio Mater. 2020 Jan 21;3(1):180-185. doi: 10.1021/acsabm.9b00876. Epub 2019 Dec 13.
2
Protein Binding and Release by Polymeric Cell-Penetrating Peptide Mimics.聚合物型细胞穿透肽模拟物的蛋白结合与释放。
Biomacromolecules. 2022 Jan 10;23(1):57-66. doi: 10.1021/acs.biomac.1c00929. Epub 2021 Dec 8.
3
Non-Covalent Carrier Hydrophobicity as a Universal Predictor of Intracellular Protein Activity.
非共价载体疏水性作为细胞内蛋白活性的通用预测因子。
Biomacromolecules. 2021 Jul 12;22(7):2850-2863. doi: 10.1021/acs.biomac.1c00242. Epub 2021 Jun 22.
4
2020 FDA drug approvals.2020年美国食品药品监督管理局批准的药物
Nat Rev Drug Discov. 2021 Feb;20(2):85-90. doi: 10.1038/d41573-021-00002-0.
5
Cell-Penetrating Anti-Protein Kinase C Theta Antibodies Act Intracellularly to Generate Stable, Highly Suppressive Regulatory T Cells.细胞穿透性抗蛋白激酶 Cθ 抗体在细胞内发挥作用,产生稳定、高度抑制性的调节性 T 细胞。
Mol Ther. 2020 Sep 2;28(9):1987-2006. doi: 10.1016/j.ymthe.2020.05.020. Epub 2020 May 23.
6
Mass Spectrometry-Based Protein Footprinting for Higher-Order Structure Analysis: Fundamentals and Applications.基于质谱的蛋白质足迹分析用于高阶结构分析:原理与应用。
Chem Rev. 2020 May 27;120(10):4355-4454. doi: 10.1021/acs.chemrev.9b00815. Epub 2020 Apr 22.
7
Higher-Order Structure Influences the Kinetics of Diethylpyrocarbonate Covalent Labeling of Proteins.高级结构影响二乙基焦碳酸酯共价标记蛋白质的动力学。
J Am Soc Mass Spectrom. 2020 Mar 4;31(3):658-665. doi: 10.1021/jasms.9b00132. Epub 2020 Jan 27.
8
Dynamic Imine Chemistry at Complex Double Emulsion Interfaces.动态亚胺化学在复杂双重乳液界面上的应用。
J Am Chem Soc. 2019 Nov 13;141(45):18048-18055. doi: 10.1021/jacs.9b06852. Epub 2019 Nov 1.
9
Polymers for cytosolic protein delivery.用于细胞质蛋白递送的聚合物。
Biomaterials. 2019 Oct;218:119358. doi: 10.1016/j.biomaterials.2019.119358. Epub 2019 Jul 15.
10
Covalent Labeling with Diethylpyrocarbonate: Sensitive to the Residue Microenvironment, Providing Improved Analysis of Protein Higher Order Structure by Mass Spectrometry.二乙基焦碳酸酯的共价标记:对残基微环境敏感,通过质谱法提供对蛋白质高级结构的改善分析。
Anal Chem. 2019 Jul 2;91(13):8516-8523. doi: 10.1021/acs.analchem.9b01732. Epub 2019 Jun 13.