与抗杀虫剂和敏感型玻璃翅叶蝉（Homalodisca vitripennis）个体相关的细菌共生体的宏基因组组装基因组
Metagenome-Assembled Genomes of Bacterial Symbionts Associated with Insecticide-Resistant and -Susceptible Individuals of the Glassy-Winged Sharpshooter (Homalodisca vitripennis).
作者信息
Ettinger Cassandra L, Byrne Frank J, Redak Richard A, Stajich Jason E
机构信息
Department of Microbiology and Plant Pathology, University of California, Riverside, Riverside, California, USA.
Department of Entomology, University of California, Riverside, Riverside, California, USA.
出版信息
Microbiol Resour Announc. 2022 Jul 21;11(7):e0050622. doi: 10.1128/mra.00506-22. Epub 2022 Jun 16.
Abstract
The role of microbes in insecticide resistance is an emerging question. Here, we describe six metagenome-assembled genomes (MAGs) associated with the glassy-winged sharpshooter (Homalodisca vitripennis [Germar, 1821]) (Hemiptera, Cicadellidae). MAGs representing the obligate symbionts Sulcia muelleri and Baumannia cicadellinicola and the facultative symbiont were obtained from imidacloprid-resistant and imidacloprid-susceptible sharpshooters.
摘要
微生物在抗杀虫剂方面的作用是一个新出现的问题。在此，我们描述了与玻璃翅叶蝉（Homalodisca vitripennis [Germar, 1821]）（半翅目，叶蝉科）相关的六个宏基因组组装基因组（MAGs）。代表专性共生菌穆勒氏菌（Sulcia muelleri）和叶蝉鲍氏菌（Baumannia cicadellinicola）以及兼性共生菌的MAGs是从对吡虫啉有抗性和对吡虫啉敏感的叶蝉中获得的。
相似文献
1
Metagenome-Assembled Genomes of Bacterial Symbionts Associated with Insecticide-Resistant and -Susceptible Individuals of the Glassy-Winged Sharpshooter (Homalodisca vitripennis).与抗杀虫剂和敏感型玻璃翅叶蝉（Homalodisca vitripennis）个体相关的细菌共生体的宏基因组组装基因组
Microbiol Resour Announc. 2022 Jul 21;11(7):e0050622. doi: 10.1128/mra.00506-22. Epub 2022 Jun 16.
2
Differential genome evolution between companion symbionts in an insect-bacterial symbiosis.昆虫-细菌共生体系中伴生共生菌之间的基因组差异进化
mBio. 2014 Sep 30;5(5):e01697-14. doi: 10.1128/mBio.01697-14.
3
Geographical survey of the mycobiome and microbiome of Southern California glassy-winged sharpshooters.南加州玻璃翅蝉的真菌组和微生物组的地理调查。
mSphere. 2023 Oct 24;8(5):e0026723. doi: 10.1128/msphere.00267-23. Epub 2023 Oct 6.
4
Genome-Wide Transcriptional Dynamics in the Companion Bacterial Symbionts of the Glassy-Winged Sharpshooter (Cicadellidae: ) Reveal Differential Gene Expression in Bacteria Occupying Multiple Host Organs.玻璃翅叶蝉（叶蝉科： ）伴生细菌共生体中的全基因组转录动态揭示了占据多个宿主器官的细菌中的差异基因表达。
G3 (Bethesda). 2017 Sep 7;7(9):3073-3082. doi: 10.1534/g3.117.044255.
5
Fitness Costs Associated With Insecticide Resistance in Populations of Homalodisca vitripennis Germar (Hemiptera: Cicadellidae).种群中杀虫剂抗性与 Homalodisca vitripennis Germar（半翅目：叶蝉科）相关的适应代价。
J Econ Entomol. 2023 Apr 24;116(2):560-564. doi: 10.1093/jee/toad009.
6
Insecticide resistance in California populations of the glassy-winged sharpshooter Homalodisca vitripennis.加利福尼亚地区玻璃叶蝉群体的杀虫剂抗性。
Pest Manag Sci. 2021 May;77(5):2315-2323. doi: 10.1002/ps.6258. Epub 2021 Feb 2.
7
Transcriptome and population structure of glassy-winged sharpshooters (Homalodisca vitripennis) with varying insecticide resistance in southern California.南加州具有不同抗药性的玻璃翅实蝇转录组和种群结构。
BMC Genomics. 2022 Oct 22;23(1):721. doi: 10.1186/s12864-022-08939-1.
8
Improved draft reference genome for the Glassy-winged Sharpshooter (Homalodisca vitripennis), a vector for Pierce's disease.改良的玻璃翅实蝇（Homalodisca vitripennis）参考基因组草案，该实蝇是皮尔斯病的传播媒介。
G3 (Bethesda). 2021 Sep 27;11(10). doi: 10.1093/g3journal/jkab255.
9
Lineage-Specific Patterns of Genome Deterioration in Obligate Symbionts of Sharpshooter Leafhoppers.叶蝉专性共生菌基因组退化的谱系特异性模式
Genome Biol Evol. 2015 Aug 10;8(1):296-301. doi: 10.1093/gbe/evv159.
10
Glassy-Winged Sharpshooters Cease Feeding and Avoid Plants Treated With Sub-Lethal Doses of the Neonicotinoid Insecticide Imidacloprid.玻璃翅锐缘蝉停止取食并避开接触亚致死剂量新烟碱类杀虫剂吡虫啉的植物。
J Econ Entomol. 2023 Feb 10;116(1):240-248. doi: 10.1093/jee/toac201.
引用本文的文献
1
Geographical survey of the mycobiome and microbiome of Southern California glassy-winged sharpshooters.南加州玻璃翅蝉的真菌组和微生物组的地理调查。
mSphere. 2023 Oct 24;8(5):e0026723. doi: 10.1128/msphere.00267-23. Epub 2023 Oct 6.
2
Transcriptome and population structure of glassy-winged sharpshooters (Homalodisca vitripennis) with varying insecticide resistance in southern California.南加州具有不同抗药性的玻璃翅实蝇转录组和种群结构。
BMC Genomics. 2022 Oct 22;23(1):721. doi: 10.1186/s12864-022-08939-1.
本文引用的文献
1
Improved draft reference genome for the Glassy-winged Sharpshooter (Homalodisca vitripennis), a vector for Pierce's disease.改良的玻璃翅实蝇（Homalodisca vitripennis）参考基因组草案，该实蝇是皮尔斯病的传播媒介。
G3 (Bethesda). 2021 Sep 27;11(10). doi: 10.1093/g3journal/jkab255.
2
Insecticide resistance in California populations of the glassy-winged sharpshooter Homalodisca vitripennis.加利福尼亚地区玻璃叶蝉群体的杀虫剂抗性。
Pest Manag Sci. 2021 May;77(5):2315-2323. doi: 10.1002/ps.6258. Epub 2021 Feb 2.
3
Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome.人类口腔微生物组中神秘成员之间生态位分隔的功能和遗传标记。
Genome Biol. 2020 Dec 16;21(1):292. doi: 10.1186/s13059-020-02195-w.
4
Symbiont-Mediated Insecticide Detoxification as an Emerging Problem in Insect Pests.共生体介导的杀虫剂解毒作用：害虫领域的一个新问题
Front Microbiol. 2020 Sep 30;11:547108. doi: 10.3389/fmicb.2020.547108. eCollection 2020.
5
The Midgut Microbiota of Colombian Populations with Different Levels of Resistance to the Insecticide Lambda-cyhalothrin.对氯氟氰菊酯具有不同抗性水平的哥伦比亚人群的中肠微生物群
Insects. 2020 Sep 1;11(9):584. doi: 10.3390/insects11090584.
6
GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database.GTDB-Tk：一个使用基因组分类数据库对基因组进行分类的工具包。
Bioinformatics. 2019 Nov 15;36(6):1925-7. doi: 10.1093/bioinformatics/btz848.
7
MetaBAT 2: an adaptive binning algorithm for robust and efficient genome reconstruction from metagenome assemblies.MetaBAT 2：一种用于从宏基因组组装中进行稳健且高效的基因组重建的自适应分箱算法。
PeerJ. 2019 Jul 26;7:e7359. doi: 10.7717/peerj.7359. eCollection 2019.
8
GToTree: a user-friendly workflow for phylogenomics.GToTree：一个用户友好的系统发育基因组学工作流程。
Bioinformatics. 2019 Oct 15;35(20):4162-4164. doi: 10.1093/bioinformatics/btz188.
9
D-GENIES: dot plot large genomes in an interactive, efficient and simple way.D-GENIES：以交互式、高效且简单的方式绘制大型基因组的点图。
PeerJ. 2018 Jun 4;6:e4958. doi: 10.7717/peerj.4958. eCollection 2018.
10
Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy.通过去重、聚合和评分策略从宏基因组中恢复基因组。
Nat Microbiol. 2018 Jul;3(7):836-843. doi: 10.1038/s41564-018-0171-1. Epub 2018 May 28.
Zotero 插件