Department of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, China.
Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Beijing, China.
J Clin Lab Anal. 2022 Jul;36(7):e24561. doi: 10.1002/jcla.24561. Epub 2022 Jun 19.
This study aimed to analyze the expression of 8-oxoguanine DNA glycosylase (OGG1) in patients with hepatocellular carcinoma (HCC) and its effect on prognosis by bioinformatics techniques and to determine its possible carcinogenic mechanism through data mining.
The difference in OGG1 expression between healthy people and HCC patients was searched and analyzed by TCGA and GEO databases, and the effect of OGG1 on prognosis was judged by survival analysis. Meanwhile, the possible molecular mechanism of OGG1 in the tumorigenesis and development of HCC was explored by GO analysis, KEGG analysis, immune infiltration analysis, protein-protein interaction network, promoter methylation analysis, and so forth. Quantitative polymerase chain reaction (qPCR) was used to examine the gene expression in 36 pairs of HCC tissues and adjacent tissues.
The expression of OGG1 in HCC patients was higher than that in healthy people, and the overexpression of OGG1 might stimulate cell proliferation by increasing the activity of cell cycle-related proteins.
The alteration of OGG1 was significantly correlated with the tumorigenesis and development of HCC. OGG1 is expected to be a new biomarker for evaluating the prognosis of HCC and a new target for the treatment of HCC.
本研究旨在通过生物信息学技术分析肝癌(HCC)患者中 8-氧鸟嘌呤 DNA 糖基化酶(OGG1)的表达及其对预后的影响,并通过数据挖掘确定其可能的致癌机制。
通过 TCGA 和 GEO 数据库搜索和分析 OGG1 在健康人和 HCC 患者之间的表达差异,并通过生存分析判断 OGG1 对预后的影响。同时,通过 GO 分析、KEGG 分析、免疫浸润分析、蛋白质-蛋白质相互作用网络、启动子甲基化分析等方法探讨 OGG1 在 HCC 发生发展中的可能分子机制。采用实时定量聚合酶链反应(qPCR)检测 36 对 HCC 组织及其相邻组织中的基因表达。
与健康人相比,HCC 患者的 OGG1 表达水平更高,OGG1 的过表达可能通过增加细胞周期相关蛋白的活性来刺激细胞增殖。
OGG1 的改变与 HCC 的发生发展显著相关。OGG1 有望成为评估 HCC 预后的新生物标志物和 HCC 治疗的新靶点。