Stalinskaya A L, Chikunov S Y, Pustolaikina I A, Kulakov I V
Institute of Chemistry, Tyumen State University, 625003 Tyumen, Russia.
Buketov Karaganda University, 100024 Karaganda, Kazakhstan.
Russ J Gen Chem. 2022;92(5):914-924. doi: 10.1134/S107036322205022X. Epub 2022 Jun 14.
Computational study of some details of the cyclization reaction between 3,5-diacetyl-2,6-dimethylpyridine and salicylic aldehyde in an acidic medium was performed by the DFT RB3LYP/6-31G method using the Gaussian-2016 software package. It was shown that protonation of the pyridine nitrogen atom leads to a significant increase in the charge of the hydrogen atom of the 2-methyl group of pyridine and the methyl acetyl group. This leads to the growth of the methyl group CH-acidity and enolization of the acetyl group. It was also found that the protonated tautomeric enol form of 3,5-diacetyl-2,6-dimethylpyridine gives a stable pre-reaction complex with salicylic aldehyde due to the formation of three hydrogen bonds. The formation of this pre-reaction complex, apparently, leads to the implementation of the Knoevenagel reaction, instead of the alternative possible Claisen-Schmidt reaction of salicylic aldehyde at the acetyl group of pyridine. The possible biological activity of the previously obtained cyclization products was evaluated by molecular docking using the AutoDock Vina software. Some cyclization products showed higher values of the binding affinity with the selected target proteins in comparison with the known antiviral drugs Nevirapine and Favipiravir. The results obtained confirm the correctness of the proposed cyclization mechanism between 3,5-diacetyl-2,6-dimethylpyridine and salicylic aldehyde. This also makes it possible to assess the prospects of previously obtained derivatives of epoxybenzo[7,8]oxocino[4,3-]pyridine as synthetic analogs of natural integrastatins A, B for further synthesis and study of their antiviral activity.
使用高斯 - 2016软件包,通过DFT RB3LYP/6 - 31G方法对3,5 - 二乙酰基 - 2,6 - 二甲基吡啶与水杨酸醛在酸性介质中的环化反应的一些细节进行了计算研究。结果表明,吡啶氮原子的质子化导致吡啶2 - 甲基和甲基乙酰基的氢原子电荷显著增加。这导致甲基的CH - 酸性增强以及乙酰基的烯醇化。还发现,3,5 - 二乙酰基 - 2,6 - 二甲基吡啶的质子化互变异构烯醇形式由于形成三个氢键而与水杨酸醛形成稳定的预反应复合物。这种预反应复合物的形成显然导致了Knoevenagel反应的发生,而不是水杨酸醛在吡啶乙酰基上可能发生的替代克莱森 - 施密特反应。使用AutoDock Vina软件通过分子对接评估了先前获得的环化产物的可能生物活性。与已知的抗病毒药物奈韦拉平和法匹拉韦相比,一些环化产物与所选靶蛋白的结合亲和力值更高。所得结果证实了3,5 - 二乙酰基 - 2,6 - 二甲基吡啶与水杨酸醛之间所提出的环化机制的正确性。这也使得可以评估先前获得的环氧苯并[7,8]氧杂环辛并[4,3 - ]吡啶衍生物作为天然整合素他汀A、B的合成类似物用于进一步合成及其抗病毒活性研究的前景。