IMI 507025基因组测序数据。
IMI 507025 genome sequencing data.
作者信息
Nikodinoska Ivana, Makkonen Jenny, Blande Daniel, Moran Colm
机构信息
Alltech European Headquarters, Sarney, Summerhill Road, Dunboyne, Co. Meath, Ireland.
Biosafe - Biological Safety Solutions Ltd, Microkatu 1M, Kuopio, Finland.
出版信息
Data Brief. 2022 Jul 8;43:108446. doi: 10.1016/j.dib.2022.108446. eCollection 2022 Aug.
The genome sequence data for the pickled cucumbers isolate, IMI 507025, is reported. The raw reads and analysed genome reads were deposited at NCBI under Bioproject with the accession number PRJNA814992. The number of contigs before and after trimming were 17 and 12 contigs, respectively. The total size of the genome was 1,795,439 bp containing 1,811 total genes, of which 1,751 were coding sequences. IMI 507025 identity was determined via average nucleotide identity (ANI), obtaining an identity value of 99.5994% between IMI 507025 and the type strain ATCC 33316, identifying the strain as . Screening for the antimicrobial resistance (AMR) and virulence genes in the genome of IMI 507025 showed no hits, confirming the safety of the tested strain. Presence of plasmids was not found.
报道了腌制黄瓜分离株IMI 507025的基因组序列数据。原始读数和分析后的基因组读数已存入NCBI的生物项目中，登录号为PRJNA814992。修剪前后的重叠群数量分别为17个和12个。基因组的总大小为1,795,439 bp，包含1,811个总基因，其中1,751个为编码序列。通过平均核苷酸同一性（ANI）确定了IMI 507025的同一性，在IMI 507025与模式菌株ATCC 33316之间获得的同一性值为99.5994%，将该菌株鉴定为 。对IMI 507025基因组中的抗菌抗性（AMR）和毒力基因进行筛选，未发现命中结果，证实了测试菌株的安全性。未发现质粒的存在。
Zotero 插件