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关于IV型胶原蛋白中亚磺酰亚胺键形成及其性质的计算见解。

Computational insights into the formation and nature of the sulfilimine bond in collagen-IV.

作者信息

Roy Anupom, Alnakhli Taqred H, Gauld James W

机构信息

Department of Chemistry and Biochemistry, University of Windsor Windsor Ontario N9B 3P4 Canada

出版信息

RSC Adv. 2022 Jul 22;12(33):21092-21102. doi: 10.1039/d2ra02105f. eCollection 2022 Jul 21.

Abstract

Collagen IV is essential component of basement membrane in the tissues. It provides proper cellular structure by the formation of sulfilimine bond (S[double bond, length as m-dash]N) between methionine and lysine or hydroxylysine (cross-links) residues which can be formed with or without post-translational modification. The sulfilimine bond has critical roles in tissue development and human diseases. Peroxidasin, a basement membrane peroxidase, generates reactive halogen species including hypobromous (HOBr) acid and hypochlorous (HOCl) acid which help to form halosulfonium or haloamine. The sulfilamine bond can be formed either by the formation of halosulfonium or by the formation of halomine. The aim of the study is the investigation of the formation of sulfilimine bond and its nature in collagen IV using multi-scale approach that included MD, QM-cluster, systematic series of small models, and NBO analysis. These results suggest that sulfilimine bond can be formed either brominated/chlorinated halosulfonium or haloamine pathway. The results of systematic series of small model indicate that the formation of sulfilimine complex from halosulfonium happens through the formation of positively charged halosulfonated sulfilimine complex. It also suggests that the formation of sulfilimine complex from haloamine occurs through the formation of positively charged sulfilimine complex where the S and N bond forms and halogen goes off at the same time. Furthermore, the NBO analysis suggest the S and N bond is strongly polarized toward nitrogen in both single protonated and neutral system, N ← S and also indicate the existence of a coordinate covalent ( dative) bond.

摘要

IV型胶原蛋白是组织中基底膜的重要组成部分。它通过甲硫氨酸与赖氨酸或羟赖氨酸(交联)残基之间形成亚磺酰亚胺键(S=N)来提供合适的细胞结构,这种键的形成可以有或没有翻译后修饰。亚磺酰亚胺键在组织发育和人类疾病中起着关键作用。过氧化物酶,一种基底膜过氧化物酶,会产生活性卤素物种,包括次溴酸(HOBr)和次氯酸(HOCl),这些有助于形成卤代锍或卤代胺。亚磺酰胺键可以通过卤代锍的形成或卤代胺的形成来形成。本研究的目的是使用多尺度方法研究IV型胶原蛋白中亚磺酰亚胺键的形成及其性质,该方法包括分子动力学(MD)、量子力学簇、一系列系统的小模型和自然键轨道(NBO)分析。这些结果表明,亚磺酰亚胺键可以通过溴化/氯化卤代锍或卤代胺途径形成。一系列系统小模型的结果表明,卤代锍形成亚磺酰亚胺配合物是通过形成带正电荷的卤代磺酰化亚磺酰亚胺配合物。这也表明,卤代胺形成亚磺酰亚胺配合物是通过形成带正电荷的亚磺酰亚胺配合物,其中S和N键形成,同时卤素离去。此外,NBO分析表明,在单质子化和中性体系中,S和N键都强烈地向氮极化,N←S,并且还表明存在配位共价(配位)键。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4510/9306264/72d7a59c5ff9/d2ra02105f-f1.jpg

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