Liu Wenjia, Ying Nanjiao, Rao Xin, Chen Xiaodong
School of Electronics and Information Engineering, Hangzhou Dianzi University, Hangzhou 310018, China.
School of Automation, Hangzhou Dianzi University, Hangzhou 310018, China.
Curr Issues Mol Biol. 2022 Aug 24;44(9):3835-3848. doi: 10.3390/cimb44090263.
Gastric cancer is a common tumor with high morbidity and mortality. MicroRNA (miRNA) can regulate gene expression at the translation level and various tumorigenesis processes, playing an important role in tumor occurrence and prognosis. This study aims to screen miRNA associated with gastric cancer prognosis as biomarkers and explore the regulatory genes and related signaling pathways. In this work, R language was used for the standardization and differential analysis of miRNA and mRNA expression profiles. Samples were randomly divided into a testing group and a training group. Subsequently, we built the five miRNAs (has-miR-9-3p, has-miR-135b-3p, has-miR-143-5p, has-miR-942-3p, has-miR-196-3p) prognostic modules, verified and evaluated their prediction ability by the Cox regression analysis. They can be used as an independent factor in the prognosis of gastric cancer. By predicting and analyzing potential biological functions of the miRNA target genes, this study found that the AR gene was not only a hub gene in the PPI network, but also associated with excessive survival of patients. In conclusion, this study demonstrated that hsa-miR-942-3p could be a potential prognostic marker of gastric cancer associated with the AR and MAPK/ERK signaling pathways. The results of this study provide insights into the occurrence and development of gastric cancer.
胃癌是一种发病率和死亡率都很高的常见肿瘤。微小RNA(miRNA)可在翻译水平调控基因表达及多种肿瘤发生过程,在肿瘤的发生和预后中发挥重要作用。本研究旨在筛选与胃癌预后相关的miRNA作为生物标志物,并探索其调控基因及相关信号通路。在这项工作中,使用R语言对miRNA和mRNA表达谱进行标准化和差异分析。样本被随机分为测试组和训练组。随后,构建了五个miRNA(hsa-miR-9-3p、hsa-miR-135b-3p、hsa-miR-143-5p、hsa-miR-942-3p、hsa-miR-196-3p)预后模型,通过Cox回归分析验证并评估其预测能力。它们可作为胃癌预后的独立因素。通过预测和分析miRNA靶基因的潜在生物学功能,本研究发现AR基因不仅是PPI网络中的枢纽基因,还与患者的过度生存相关。总之,本研究表明hsa-miR-942-3p可能是与AR和MAPK/ERK信号通路相关的胃癌潜在预后标志物。本研究结果为胃癌的发生和发展提供了见解。