从科德角国家海岸野生蔓越莓沼泽土壤中分离出的假单胞菌属菌株MWU13 - 2100和MWU13 - 2105的基因组序列草图
Draft Genome Sequences of Pseudomonas sp. Strains MWU13-2100 and MWU13-2105 Isolated from Wild Cranberry Bog Soil in the Cape Cod National Seashore.
作者信息
Mayer Brian, Soby Scott
机构信息
Biomedical Sciences, College of Graduate Studies, Midwestern University, Glendale, Arizona, USA.
College of Veterinary Medicine, Midwestern University, Glendale, Arizona, USA.
出版信息
Microbiol Resour Announc. 2022 Oct 20;11(10):e0055722. doi: 10.1128/mra.00557-22. Epub 2022 Sep 22.
Abstract
Pseudomonas sp. strains MWU13-2100 and MWU13-2105 were isolated from a wild cranberry bog with Pipestone loamy coarse sand soil in Truro, Massachusetts, and taxonomically assigned based on whole-genome sequences. The draft genomes are most closely related to (41.4% and 41.8% dDDH), but with only 50.8 dDDH to each other.
摘要
假单胞菌属菌株MWU13 - 2100和MWU13 - 2105是从马萨诸塞州特鲁罗的一个含有派普斯通壤质粗砂土的野生蔓越莓沼泽中分离出来的，并根据全基因组序列进行了分类学鉴定。草图基因组与……关系最为密切（分别为41.4%和41.8%的dDDH），但彼此之间只有50.8 dDDH。 （注：原文中“most closely related to”后面缺少具体内容）
相似文献
1
Draft Genome Sequences of Pseudomonas sp. Strains MWU13-2100 and MWU13-2105 Isolated from Wild Cranberry Bog Soil in the Cape Cod National Seashore.
Microbiol Resour Announc. 2022 Oct 20;11(10):e0055722. doi: 10.1128/mra.00557-22. Epub 2022 Sep 22.
2
Draft Genome Sequences of Pseudomonas MWU13-2625 and MWU12-2115, Isolated from a Wild Cranberry Bog at the Cape Cod National Seashore.
Microbiol Resour Announc. 2018 Sep 27;7(12). doi: 10.1128/MRA.00992-18. eCollection 2018 Sep.
3
Draft Genome Sequence of Pseudomonas sp. Strain MWU13-2860, Isolated from a Wild Cranberry Bog in Truro, Massachusetts.
Microbiol Resour Announc. 2018 Oct 4;7(13). doi: 10.1128/MRA.01007-18. eCollection 2018 Oct.
4
Draft Genome Sequences of Pseudomonas sp. Strains MWU12-2037 and MWU12-2345, Isolated from Peat and Sandy Bog Soils in the Cape Cod National Seashore, Massachusetts.
Microbiol Resour Announc. 2022 Aug 18;11(8):e0053622. doi: 10.1128/mra.00536-22. Epub 2022 Jul 12.
5
Draft Genome Sequence of Pseudomonas sp. Strain MWU12-2534b, Isolated from a Wild Cranberry Bog in Truro, Massachusetts.
Microbiol Resour Announc. 2018 Oct 4;7(13). doi: 10.1128/MRA.01005-18. eCollection 2018 Oct.
6
Draft Genome Sequence of Pseudomonas sp. Strains MWU12-2319 and MWU12-2311, Isolated from a Wild Cranberry Bog in the Cape Cod National Seashore.
Microbiol Resour Announc. 2022 Nov 17;11(11):e0086922. doi: 10.1128/mra.00869-22. Epub 2022 Oct 12.
7
Draft Genomic Sequences of Chromobacterium sp. nov. Strains MWU13-2610 and MWU14-2602, Isolated from Wild Cranberry Bogs in Massachusetts.
Genome Announc. 2018 Apr 12;6(15):e00332-18. doi: 10.1128/genomeA.00332-18.
8
Draft Genome Sequence of Pseudomonas sp. Strain MWU13-2517, Isolated from a Wild Cranberry Bog in Provincetown, MA.
Microbiol Resour Announc. 2022 Aug 18;11(8):e0054522. doi: 10.1128/mra.00545-22. Epub 2022 Jul 19.
9
Draft Genome Sequence of Pseudomonas sp. Strain MWU13-3659, Isolated from Commercial Cranberry Bog Soil in Massachusetts, USA.
Microbiol Resour Announc. 2022 Nov 17;11(11):e0088022. doi: 10.1128/mra.00880-22. Epub 2022 Oct 17.
10
Draft Genome Sequence of sp. Strain MWU13-2055, Isolated from a Wild Cranberry Fruit Surface in Massachusetts, USA.
Microbiol Resour Announc. 2022 Oct 20;11(10):e0056522. doi: 10.1128/mra.00565-22. Epub 2022 Sep 8.
本文引用的文献
1
Network analysis of ten thousand genomes shed light on Pseudomonas diversity and classification.
Microbiol Res. 2022 Jan;254:126919. doi: 10.1016/j.micres.2021.126919. Epub 2021 Nov 15.
2
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy.
Nat Commun. 2019 May 16;10(1):2182. doi: 10.1038/s41467-019-10210-3.
3
Volatile Organic Compounds Produced by Pseudomonas chlororaphis subsp. aureofaciens SPS-41 as Biological Fumigants To Control Ceratocystis fimbriata in Postharvest Sweet Potatoes.
J Agric Food Chem. 2019 Apr 3;67(13):3702-3710. doi: 10.1021/acs.jafc.9b00289. Epub 2019 Mar 22.
4
Analysis of the genome sequence of plant beneficial strain Pseudomonas sp. RU47.
J Biotechnol. 2018 Sep 10;281:183-192. doi: 10.1016/j.jbiotec.2018.07.023. Epub 2018 Jul 18.
5
Biocontrol Activity of Volatile-Producing and Against and spp. Predominant in Stored Rice Grains: Study II.
Mycobiology. 2018 Mar 27;46(1):52-63. doi: 10.1080/12298093.2018.1454015. eCollection 2018.
6
Genetic Diversity of Nitrogen-Fixing and Plant Growth Promoting Species Isolated from Sugarcane Rhizosphere.
Front Microbiol. 2017 Jul 14;8:1268. doi: 10.3389/fmicb.2017.01268. eCollection 2017.
7
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595. eCollection 2017 Jun.
8
Role of the GacS Sensor Kinase in the Regulation of Volatile Production by Plant Growth-Promoting SBW25.
Front Plant Sci. 2016 Nov 18;7:1706. doi: 10.3389/fpls.2016.01706. eCollection 2016.
9
Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.
Nucleic Acids Res. 2017 Jan 4;45(D1):D535-D542. doi: 10.1093/nar/gkw1017. Epub 2016 Nov 29.
10
RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes.
Sci Rep. 2015 Feb 10;5:8365. doi: 10.1038/srep08365.
Zotero 插件