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鉴定和分析大枣中含 BURP 结构域的基因及其在低温和干旱响应中的作用。

Identification and expression analysis of BURP domain-containing genes in jujube and their involvement in low temperature and drought response.

机构信息

College of Forestry, Research Center for Jujube Engineering and Technology of State Forestry Administration, Northwest A&F University, Yangling, 712100, Shaanxi, China.

Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518116, Guangdong, China.

出版信息

BMC Genomics. 2022 Oct 6;23(1):692. doi: 10.1186/s12864-022-08907-9.

Abstract

BACKGROUND

Plant-specific BURP domain-containing genes are involved in plant development and stress responses. However, the role of BURP family in jujube (Ziziphus jujuba Mill.) has not been investigated.

RESULTS

In this study, 17 BURP genes belonging to four subfamilies were identified in jujube based on homology analysis, gene structures, and conserved motif confirmation. Gene duplication analysis indicated both tandem duplication and segmental duplication had contributed to ZjBURP expansion. The ZjBURPs were extensively expressed in flowers, young fruits, and jujube leaves. Transcriptomic data and qRT-PCR analysis further revealed that ZjBURPs also significantly influence fruit development, and most genes could be induced by low temperature, salinity, and drought stresses. Notably, several BURP genes significantly altered expression in response to low temperature (ZjPG1) and drought stresses (ZjBNM7, ZjBNM8, and ZjBNM9).

CONCLUSIONS

These results provided insights into the possible roles of ZjBURPs in jujube development and stress response. These findings would help selecting candidate ZjBURP genes for cold- and drought-tolerant jujube breeding.

摘要

背景

植物特异性 BURP 结构域基因参与植物发育和应激反应。然而,BURP 家族在枣(Ziziphus jujuba Mill.)中的作用尚未得到研究。

结果

本研究基于同源分析、基因结构和保守基序确认,在枣中鉴定出 17 个属于四个亚家族的 BURP 基因。基因复制分析表明,串联复制和片段复制都促成了 ZjBURP 的扩张。ZjBURPs 在花、幼果和枣叶中广泛表达。转录组数据和 qRT-PCR 分析进一步表明,ZjBURPs 也显著影响果实发育,大多数基因可以被低温、盐度和干旱胁迫诱导。值得注意的是,一些 BURP 基因在响应低温(ZjPG1)和干旱胁迫(ZjBNM7、ZjBNM8 和 ZjBNM9)时表达显著改变。

结论

这些结果为 ZjBURPs 在枣发育和应激反应中的可能作用提供了新的见解。这些发现将有助于选择候选的 ZjBURP 基因用于培育耐寒和耐旱的枣。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f49/9541082/56912f78e04f/12864_2022_8907_Fig1_HTML.jpg

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