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sp. nov.,分离自围礁珊瑚周围的海水。

sp. nov., isolated from seawater surrounding scleractinian coral .

机构信息

Shenzhen Institute of Guangdong Ocean University, Binhai 2 Road, Shenzhen, 518120, PR China.

College of Fisheries, Guangdong Ocean University, Zhanjiang, 524088, PR China.

出版信息

Int J Syst Evol Microbiol. 2022 Oct;72(10). doi: 10.1099/ijsem.0.005607.

Abstract

A Gram-stain-negative, aerobic, rod-shaped bacterium (D1M17) was isolated from the seawater surrounding scleractinian coral in Daya Bay, Shenzhen, PR China. Strain D1M17 grew with 0-10 % (w/v) NaCl (optimum, 3-4 %), at 15-37 °C (optimum, 28 °C) and at pH 4.5-8.5 (optimum, pH 7.0-7.5). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain D1M17 formed a lineage within the genus , family , and it was distinct from the most closely related species LMG 25375, JCM 17453 and KCTC 22663 with 16S rRNA gene sequence similarities of 97.2, 97.2 and 97.1 %, respectively. The major respiratory quinone was MK-6. The predominant fatty acids (more than 10 %) were iso-C (28.8 %), iso-C 3-OH (21.5 %) and iso-C G (13.1 %). The DNA G+C content of D1M17 was 34.4 mol%. The polar lipids in D1M17 comprised one phospholipid and five unknown polar lipids. Phenotypic characteristics (physiological, biochemical and chemotaxonomic) also supported the taxonomic novelty of this isolate. Thus, strain D1M17 is considered to represent a novel species within the genus , for which the name sp. nov. is proposed. The type strain is D1M17 (=KCTC 92172= MCCC 1K07224).

摘要

一株革兰氏阴性、需氧、杆状细菌(D1M17)从中国深圳大亚湾周围的硬珊瑚海水中分离得到。菌株 D1M17 在 0-10%(w/v)NaCl(最佳,3-4%)、15-37°C(最佳,28°C)和 pH4.5-8.5(最佳,pH7.0-7.5)的条件下生长。基于 16S rRNA 基因序列的系统发育分析表明,菌株 D1M17 形成了属内的一个谱系,与最密切相关的种 LMG 25375、JCM 17453 和 KCTC 22663 的 16S rRNA 基因序列相似性分别为 97.2%、97.2%和 97.1%。主要呼吸醌为 MK-6。主要脂肪酸(超过 10%)为 iso-C(28.8%)、iso-C 3-OH(21.5%)和 iso-C G(13.1%)。D1M17 的 DNA G+C 含量为 34.4mol%。D1M17 的极性脂含有一个磷脂和五个未知的极性脂。表型特征(生理、生化和化学分类学)也支持该分离物的分类新颖性。因此,菌株 D1M17 被认为代表了属内的一个新种,建议将其命名为 sp. nov.。模式菌株为 D1M17(=KCTC 92172=MCCC 1K07224)。

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