Gladish N, Merrill S M, Kobor Michael S
Centre for Molecular Medicine and Therapeutics, Department of Medical Genetics, BC Children's Hospital Research Institute, University of British Columbia, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.
School of Medicine, Department of Epidemiology & Public Health, Stanford University, 1701 Page Mill Road, Palo Alto, CA, 94304-1210, USA.
Curr Environ Health Rep. 2022 Dec;9(4):661-672. doi: 10.1007/s40572-022-00381-5. Epub 2022 Oct 15.
There is a great deal of interest regarding the biological embedding of childhood trauma and social exposures through epigenetic mechanisms, including DNA methylation (DNAm), but a comprehensive understanding has been hindered by issues of limited reproducibility between studies. This review presents a summary of the literature on childhood trauma and DNAm, highlights issues in the field, and proposes some potential solutions.
Investigations of the associations between DNAm and childhood trauma are commonly performed using candidate gene approaches, specifically involving genes related to neurological and stress pathways. Childhood trauma is defined in a wide range of ways in several societal contexts. However, although variations in DNAm are frequently found in stress-related genes, unsupervised epigenome-wide association studies (EWAS) have shown limited reproducibility both between studies and in relating these changes to exposures. The reproducibility of childhood trauma DNAm studies, and the field of social epigenetics in general, may be improved by increasing sample sizes, standardizing variables, making use of effect size thresholds, collecting longitudinal and intervention samples, appropriately accounting for known confounding factors, and applying causal analysis wherever possible, such as "two-step epigenetic Mendelian randomization."
人们对童年创伤和社会暴露通过表观遗传机制(包括DNA甲基化,DNAm)进行生物嵌入极为关注,但研究间再现性有限的问题阻碍了全面理解。本综述总结了关于童年创伤与DNAm的文献,突出该领域的问题,并提出一些潜在解决方案。
DNAm与童年创伤之间关联的研究通常采用候选基因方法,特别涉及与神经和应激途径相关的基因。在多个社会背景下,童年创伤有多种定义方式。然而,尽管在应激相关基因中经常发现DNAm变化,但无监督全表观基因组关联研究(EWAS)在研究间以及将这些变化与暴露联系起来方面的再现性有限。通过增加样本量、标准化变量、使用效应量阈值、收集纵向和干预样本、适当考虑已知混杂因素以及尽可能应用因果分析(如“两步表观遗传孟德尔随机化”),童年创伤DNAm研究以及整个社会表观遗传学领域的再现性可能会得到提高。