Rocca Andrea, Braga Luca, Volpe Maria Concetta, Maiocchi Serena, Generali Daniele
Department of Medical, Surgical and Health Sciences, University of Trieste, 34149 Trieste, Italy.
Functional Cell Biology Group, International Centre for Genetic Engineering and Biotechnology (ICGEB), 34149 Trieste, Italy.
Cancers (Basel). 2022 Oct 28;14(21):5306. doi: 10.3390/cancers14215306.
Although gene alterations of the RAS/RAF/MEK/ERK pathway are uncommon in breast cancer, this pathway is frequently activated in breast tumors, implying its role in tumor progression. We describe, after a revision of the literature, the frequency and types of gene alterations affecting this pathway in breast cancer by analyzing some public datasets from cBioPortal. Moreover, we consider their prognostic and predictive impact on treatment response, along with the role of transcriptomic predictors of RAS pathway activation. Our analysis shows that the driver alterations in RAS/RAF/MEK/ERK pathway-related genes are detected in 11% of primary breast cancers. The most frequently mutated genes are NF1 and KRAS, while copy number alterations mainly affect KRAS and BRAF, especially in basal-like tumors. The subgroup of patients carrying these alterations shows a worse prognosis; alterations in NF1 and RAF1 are associated with significantly reduced breast-cancer-specific survival in multivariate analysis. The literature review shows that the pathway is implicated, either by genetic or epigenetic alterations or by signaling network adaptations, in the mechanisms of sensitivity and resistance to a wide range of drugs used in the treatment of breast cancer. A thorough understanding of these alterations is critical for developing combination therapies that can delay or overcome drug resistance.
尽管RAS/RAF/MEK/ERK通路的基因改变在乳腺癌中并不常见,但该通路在乳腺肿瘤中经常被激活,这暗示了其在肿瘤进展中的作用。在对文献进行综述之后,我们通过分析cBioPortal中的一些公共数据集,描述了乳腺癌中影响该通路的基因改变的频率和类型。此外,我们考虑了它们对治疗反应的预后和预测影响,以及RAS通路激活的转录组预测因子的作用。我们的分析表明,在11%的原发性乳腺癌中检测到RAS/RAF/MEK/ERK通路相关基因的驱动改变。最常发生突变的基因是NF1和KRAS,而拷贝数改变主要影响KRAS和BRAF,尤其是在基底样肿瘤中。携带这些改变的患者亚组显示出更差的预后;在多变量分析中,NF1和RAF1的改变与乳腺癌特异性生存率显著降低相关。文献综述表明,该通路通过基因或表观遗传改变或信号网络适应,参与了乳腺癌治疗中广泛使用的多种药物的敏感性和耐药性机制。深入了解这些改变对于开发能够延缓或克服耐药性的联合疗法至关重要。