Suppr超能文献

树枝双槽绦虫(绦虫纲:双叶槽绦虫目)幼虫和成虫阶段的比较转录组分析

Comparative transcriptomic analysis of the larval and adult stages of Dibothriocephalus dendriticus (Cestoda: Diphyllobothriidea).

作者信息

Sidorova Tuyana Valeryevna, Kutyrev Ivan Alexandrovich, Khabudaev Kirill Vladimirovich, Sukhanova Lyubov Vasiliyevna, Zheng Yadong, Dugarov Zhargal Nimaevich, Mazur Olga Evgenievna

机构信息

Institute of General and Experimental Biology, Siberian Branch of Russian Academy of Sciences, 670047, Ulan-Ude, Russia.

Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Irkutsk, 664033, Russia.

出版信息

Parasitol Res. 2023 Jan;122(1):145-156. doi: 10.1007/s00436-022-07708-z. Epub 2022 Nov 12.

Abstract

Tapeworms of the genus Dibothriocephalus are widely distributed throughout the world, some of which are agents of human diphyllobothriasis, one of the most important fish-borne zoonoses caused by a cestode parasite. Genomic and transcriptomic data can be used to develop future diagnostic tools and epidemiological studies. The present work focuses on a comparative analysis of the transcriptomes of adult and plerocercoid D. dendriticus and the identification of their differentially expressed genes (DEGs). Transcriptome assembly and analysis yielded and annotated 35,129 unigenes, noting that 16,568 (47%) unigenes were not annotated in known databases, which may indicate a unique set of expressed transcripts for D. dendriticus. A total of 8022 differentially expressed transcripts were identified, including 3225 upregulated and 4797 downregulated differentially expressed transcripts from the plerocercoid and adult animals. The analysis of DEGs has shown that among the most differentially expressed genes, there are important genes characteristic of each stage. Thus, several genes are characteristic of D. dendriticus plerocercoids, including fatty acid-binding protein and ferritin. Among the most highly expressed DEGs of the adult stage of D. dendriticus is the Kunitz-type serine protease inhibitor, in two putative isoforms. The analyses of GO and KEGG metabolic pathways revealed that a large number of the DEGs of D. dendriticus are associated with the biosynthesis of various substances such as arginine and folate, as well as with various metabolic pathways such as galactose metabolism, selenocompound metabolism, and phosphonate and phosphinate metabolism. This will contribute to further research aimed at identifying targets for new generation drugs and the development of specific vaccines.

摘要

裂头绦虫属的绦虫广泛分布于世界各地,其中一些是人类阔节裂头绦虫病的病原体,阔节裂头绦虫病是由一种绦虫寄生虫引起的最重要的食源性人畜共患病之一。基因组和转录组数据可用于开发未来的诊断工具和进行流行病学研究。目前的工作重点是对成年和裂头蚴阶段的树枝状裂头绦虫转录组进行比较分析,并鉴定其差异表达基因(DEG)。转录组组装和分析产生并注释了35129个单基因,注意到16568个(47%)单基因在已知数据库中未得到注释,这可能表明树枝状裂头绦虫有一组独特的表达转录本。总共鉴定出8022个差异表达转录本,其中包括来自裂头蚴和成年动物的3225个上调和4797个下调的差异表达转录本。对DEG的分析表明,在差异表达最显著的基因中,有每个阶段特有的重要基因。因此,有几个基因是树枝状裂头绦虫裂头蚴特有的,包括脂肪酸结合蛋白和铁蛋白。在树枝状裂头绦虫成虫阶段表达最高的DEG中,有两种假定异构体的Kunitz型丝氨酸蛋白酶抑制剂。对基因本体(GO)和京都基因与基因组百科全书(KEGG)代谢途径的分析表明,树枝状裂头绦虫的大量DEG与精氨酸和叶酸等各种物质的生物合成有关,也与半乳糖代谢、硒化合物代谢以及膦酸酯和次膦酸酯代谢等各种代谢途径有关。这将有助于进一步开展研究,以确定新一代药物的靶点并开发特异性疫苗。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验