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深入了解呋喃、吡啶和吡嗪与 AtX 的非共价相互作用的本质。

Insight into the nature of the noncovalent interactions of furan, pyridine, and pyrazine with AtX.

机构信息

School of Pharmaceutical and Chemical Engineering, Taizhou University, Jiaojiang, 318000, Zhejiang, China.

School of Chemical Biology and Materials Engineering, Suzhou University of Science and Technology, Suzhou, China.

出版信息

J Mol Model. 2022 Dec 20;29(1):13. doi: 10.1007/s00894-022-05411-5.

Abstract

CONTEXT

The σ-hole, counterintuitive σ-hole, and lone pair-π interaction complexes formed between three heterocyclic compounds (C4H4O, C5H5N, and C4H4N2) and AtX (X = F, Cl, and Br) have been investigated with the MP2/aug-cc-pVTZ. The intensity of three noncovalent interactions formed by different heterocyclic compounds was compared, and the properties of these three noncovalent interactions were discussed. SAPT analysis shows that the electrostatic energy is dominant to the stronger interactions in the σ-hole and counterintuitive σ-hole complexes, while the dispersion energy is the main force responsible for the weaker interactions in the lone pair-π complexes. NBO analysis has also been employed.

METHODS

All the structures were optimized at the MP2/aug-cc-pVTZ (aug-cc-pVTZ-pp for Br to account for relativistic effects) level using the Gaussian 03W package (Gaussian, Inc., Wallingford, CT, USA). The basis bet superposition error (BSSE) is corrected using counterpoise method proposed by Boys and Bernardi. The NBO population analysis was carried out. The molecular electrostatic surface potentials of monomers were calculated by WFA-SAS program package. The interaction energies of the three types complexes were decomposed by using the symmetric adaptive perturbation theory SAPT of the open source ab initio electronic structure software package psi 4.0.0-beta5.

摘要

背景

采用 MP2/aug-cc-pVTZ 方法研究了三种杂环化合物(C4H4O、C5H5N 和 C4H4N2)与 AtX(X=F、Cl 和 Br)之间形成的 σ-hole、反直觉 σ-hole 和孤对-π 相互作用配合物。比较了不同杂环化合物形成的三种非共价相互作用的强度,并讨论了这三种非共价相互作用的性质。SAPT 分析表明,静电能对 σ-hole 和反直觉 σ-hole 配合物中较强相互作用起主导作用,而色散能是孤对-π 配合物中较弱相互作用的主要作用力。还进行了 NBO 分析。

方法

所有结构均在 Gaussian 03W 包(Gaussian,Inc.,Wallingford,CT,USA)中使用 MP2/aug-cc-pVTZ(为了考虑相对论效应,对 Br 使用 aug-cc-pVTZ-pp)进行优化。使用 Boys 和 Bernardi 提出的平衡原子重叠误差(BSSE)校正方法校正基态超叠加误差(BSSE)。进行了 NBO 布居分析。通过 WFA-SAS 程序包计算了单体的分子静电表面势能。使用开源从头算电子结构软件包 psi 4.0.0-beta5 的对称自适应微扰理论 SAPT 对三种类型配合物的相互作用能进行了分解。

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