School of Materials Science & Engineering, Nanjing University of Posts and Telecommunications, Nanjing 210023, China.
School of Geography and Biological Information, Nanjing University of Posts and Telecommunications, Nanjing 210023, China.
Biosensors (Basel). 2022 Dec 9;12(12):1152. doi: 10.3390/bios12121152.
Nanopores are promising single-molecule sensing devices that have been successfully used for DNA sequencing, protein identification, as well as virus/particles detection. It is important to understand and characterize the current pulses collected by nanopore sensors, which imply the associated information of the analytes, including the size, structure, and surface charge. Therefore, a signal processing program, based on the MATLAB platform, was designed to characterize the ionic current signals of nanopore measurements. In a movable data window, the selected current segment was analyzed by the adaptive thresholds and corrected by multi-functions to reduce the noise obstruction of pulse signals. Accordingly, a set of single molecular events was identified, and the abundant information of current signals with the dwell time, amplitude, and current pulse area was exported for quantitative analysis. The program contributes to the efficient and fast processing of nanopore signals with a high signal-to-noise ratio, which promotes the development of the nanopore sensing devices in various fields of diagnosis systems and precision medicine.
纳米孔是一种很有前途的单分子传感设备,已成功用于 DNA 测序、蛋白质鉴定以及病毒/颗粒检测。了解和表征纳米孔传感器采集的电流脉冲非常重要,因为这些脉冲隐含着分析物的相关信息,包括大小、结构和表面电荷。因此,设计了一个基于 MATLAB 平台的信号处理程序来对纳米孔测量的离子电流信号进行特征化。在一个可移动的数据窗口中,通过自适应阈值对选定的电流段进行分析,并通过多种功能进行修正,以减少脉冲信号的噪声干扰。因此,可以识别出一组单分子事件,并输出电流信号的丰富信息,包括停留时间、幅度和电流脉冲面积,用于定量分析。该程序有助于高效快速地处理具有高信噪比的纳米孔信号,促进了纳米孔传感设备在诊断系统和精准医疗等各个领域的发展。