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基因组范围内鉴定和表达分析槐属(Lam.)基因家族揭示对芽再生的调控作用。

Genome-Wide Identification and Expression Analysis of the Gene Family of the Drumstick Tree ( Lam.) Reveals Regulatory Effects on Shoot Regeneration.

机构信息

College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China.

Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, Guangzhou 510642, China.

出版信息

Int J Mol Sci. 2022 Dec 11;23(24):15729. doi: 10.3390/ijms232415729.

Abstract

Auxin plays a critical role in organogenesis in plants. The classical auxin signaling pathway holds that auxin initiates downstream signal transduction by degrading Aux/IAA transcription repressors that interact with ARF transcription factors. In this study, 23 genes were identified in the drumstick tree genome. All genes were located within five subfamilies based on phylogenetic evolution analysis; the gene characteristics and promoter cis-elements were also analyzed. The protein interaction network between the MoIAAs with MoARFs was complex. The gene family responded positively to NAA treatment, exhibiting different patterns and degrees, notably for , and . The three genes expressed and functioned in the nucleus; only the intact encoding protein of exhibited transcriptional activation activity. The shoot regeneration capacity in the transgenic line was considerably lower than in the wild type. These results establish a foundation for further research on gene function and provide useful information for improved tissue culture efficiency and molecular breeding of .

摘要

生长素在植物器官发生中起着关键作用。经典的生长素信号通路认为,生长素通过降解与 ARF 转录因子相互作用的 Aux/IAA 转录抑制因子,启动下游信号转导。本研究在鼓槌树基因组中鉴定了 23 个基因。所有基因都根据系统进化分析分为五个亚家族;还分析了基因特征和启动子顺式元件。MoIAAs 与 MoARFs 之间的蛋白质相互作用网络很复杂。该基因家族对 NAA 处理呈阳性反应,表现出不同的模式和程度,尤其是 、 和 。这三个基因在核内表达和发挥功能;只有 完整的编码蛋白表现出转录激活活性。转基因系的芽再生能力明显低于野生型。这些结果为进一步研究 基因功能奠定了基础,并为提高组织培养效率和鼓槌树的分子育种提供了有用信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2878/9779525/c222c4cb2a7a/ijms-23-15729-g001.jpg

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