Haranguș Antonia, Lajos Raduly, Budisan Livia, Zanoaga Oana, Ciocan Cristina, Bica Cecilia, Pirlog Radu, Simon Ioan, Simon Marioara, Braicu Cornelia, Berindan-Neagoe Ioana
Research Center for Functional Genomics, Biomedicine and Translational Medicine, "Iuliu Hațieganu" University of Medicine and Pharmacy, 400337 Cluj-Napoca, Romania.
"Leon Daniello" Clinical Hospital of Pulmonology, Bronchology Department, 400371 Cluj-Napoca, Romania.
J Pers Med. 2022 Dec 13;12(12):2056. doi: 10.3390/jpm12122056.
Background: Non-small cell lung cancer (NSCLC) is still one of the types of cancer with the highest death rates. MicroRNAs (miRNAs) play essential roles in NSCLC development. This study evaluates miRNA expression patterns and specific mechanisms in male patients with NSCLC. Methods: We report an integrated microarray analysis of miRNAs for eight matched samples of males with NSCLC compared to the study of public datasets of males with NSCLC from TCGA, followed by qRT-PCR validation. Results: For the TCGA dataset, we identified 385 overexpressed and 75 underexpressed miRNAs. Our cohort identified 54 overexpressed and 77 underexpressed miRNAs, considering a fold-change (FC) of ±1.5 and p < 0.05 as the cutoff value. The common miRNA signature consisted of eight overexpressed and nine underexpressed miRNAs. Validation was performed using qRT-PCR on the tissue samples for miR-183-3p and miR-34c-5p and on plasma samples for miR-34c-5p. We also created mRNA-miRNA regulatory networks to identify critical molecules, revealing NSCLC signaling pathways related to underexpressed and overexpressed transcripts. The genes targeted by these transcripts were correlated with overall survival. Conclusions: miRNAs and some of their target genes could play essential roles in investigating the mechanisms involved in NSCLC evolution and provide opportunities to identify potential therapeutic targets.
非小细胞肺癌(NSCLC)仍是死亡率最高的癌症类型之一。微小RNA(miRNA)在NSCLC的发展中起着至关重要的作用。本研究评估男性NSCLC患者的miRNA表达模式和具体机制。方法:我们报告了对8例男性NSCLC匹配样本的miRNA进行综合微阵列分析,并与来自TCGA的男性NSCLC公共数据集进行比较,随后进行qRT-PCR验证。结果:对于TCGA数据集,我们鉴定出385个过表达的miRNA和75个低表达的miRNA。我们的队列鉴定出54个过表达的miRNA和77个低表达的miRNA,将±1.5的倍数变化(FC)和p < 0.05作为截断值。常见的miRNA特征由8个过表达的miRNA和9个低表达的miRNA组成。使用qRT-PCR对组织样本中的miR-183-3p和miR-34c-5p以及血浆样本中的miR-34c-5p进行验证。我们还创建了mRNA-miRNA调控网络以识别关键分子,揭示与低表达和过表达转录本相关的NSCLC信号通路。这些转录本靶向的基因与总生存期相关。结论:miRNA及其一些靶基因可能在研究NSCLC演变所涉及的机制中发挥重要作用,并为识别潜在治疗靶点提供机会。