Department of Medical Microbiology and Infectious Diseases, Erasmus MC, University Medical Centre Rotterdam, Rotterdam, the Netherlands.
Mycetoma Research Centre, University of Khartoum, Khartoum, Sudan.
Mycoses. 2023 May;66(5):420-429. doi: 10.1111/myc.13561. Epub 2023 Jan 17.
Mycetoma is a neglected tropical implantation disease caused by 70 different infectious agents. Identifying the causative organism to the species level is essential for appropriate patient management. Ultrasound, histopathology, culture and two species-specific PCRs are most the commonly used methods for species identification in endemic regions. The aim of this study was to compare the diagnostic performance of these commonly used assays using sequencing of barcoding genes as the gold standard.
This descriptive cross-sectional study was conducted at the Mycetoma Research Centre, University of Khartoum, Sudan. It included 222 patients suspected of fungal mycetoma caused by Madurella mycetomatis.
154 (69.3%) were correctly identified by ultrasound, histology, culture and both species-specific PCRs. In 60 patients, at least one of the diagnostic tests failed to identify M. mycetomatis. Five patients had no evidence of eumycetoma, and for three, only the ultrasound was indicative of mycetoma. The two species-specific PCRs were the most sensitive and specific methods, followed by culture and histology. Ultrasound was the least specific as it only allowed differentiation between actinomycetoma and eumycetoma. The time to result was 9.38 minutes for ultrasound, 3.76 hours for PCR, 8.5 days for histopathology and 21 days for grain culturing.
Currently, PCR directly on DNA isolated from grains is the most rapid and reliable diagnostic tool to identify M. mycetomatis eumycetoma.
足菌肿是一种由 70 种不同病原体引起的被忽视的热带植入性疾病。确定致病生物体的种属水平对于患者的适当管理至关重要。在流行地区,超声、组织病理学、培养和两种种特异性 PCR 是最常用于鉴定种属的方法。本研究旨在比较这些常用检测方法的诊断性能,以测序的条形码基因为金标准。
这是在苏丹喀土穆大学真菌肿研究中心进行的一项描述性横断面研究。共纳入 222 例疑似由马杜拉分枝杆菌引起的真菌性足菌肿患者。
154 例(69.3%)经超声、组织学、培养和两种种特异性 PCR 正确鉴定。在 60 例患者中,至少有一种诊断检测未能鉴定出马杜拉分枝杆菌。5 例患者无真真菌肿证据,3 例仅超声提示足菌肿。两种种特异性 PCR 是最敏感和最特异的方法,其次是培养和组织学。超声特异性最低,只能区分放线菌性和真真菌肿。超声的结果时间为 9.38 分钟,PCR 为 3.76 小时,组织病理学为 8.5 天,谷物培养为 21 天。
目前,直接从谷物中提取 DNA 的 PCR 是识别马杜拉分枝杆菌真真菌肿最快速、最可靠的诊断工具。